Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
ABCA6Q8N139 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
ABCA6Q8N139 NT5C3AP1-201ENST00000394500 1012 ntBASIC33.95■■■■□ 3.03
ABCA6Q8N139 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC33.95■■■■□ 3.03
ABCA6Q8N139 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.02
ABCA6Q8N139 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC33.94■■■■□ 3.02
ABCA6Q8N139 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
ABCA6Q8N139 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC33.94■■■■□ 3.02
ABCA6Q8N139 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC33.94■■■■□ 3.02
ABCA6Q8N139 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC33.94■■■■□ 3.02
ABCA6Q8N139 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
ABCA6Q8N139 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
ABCA6Q8N139 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC33.93■■■■□ 3.02
ABCA6Q8N139 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
ABCA6Q8N139 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC33.93■■■■□ 3.02
ABCA6Q8N139 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC33.93■■■■□ 3.02
ABCA6Q8N139 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC33.93■■■■□ 3.02
ABCA6Q8N139 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC33.93■■■■□ 3.02
ABCA6Q8N139 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC33.92■■■■□ 3.02
ABCA6Q8N139 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC33.92■■■■□ 3.02
ABCA6Q8N139 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC33.92■■■■□ 3.02
ABCA6Q8N139 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC33.92■■■■□ 3.02
ABCA6Q8N139 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC33.92■■■■□ 3.02
ABCA6Q8N139 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC33.91■■■■□ 3.02
ABCA6Q8N139 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC33.91■■■■□ 3.02
ABCA6Q8N139 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC33.91■■■■□ 3.02
ABCA6Q8N139 AC133637.1-201ENST00000624115 1537 ntBASIC33.91■■■■□ 3.02
ABCA6Q8N139 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
ABCA6Q8N139 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC33.9■■■■□ 3.02
ABCA6Q8N139 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC33.9■■■■□ 3.02
ABCA6Q8N139 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC33.9■■■■□ 3.02
ABCA6Q8N139 AC104771.1-201ENST00000603335 964 ntBASIC33.9■■■■□ 3.02
ABCA6Q8N139 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC33.9■■■■□ 3.02
ABCA6Q8N139 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC33.9■■■■□ 3.02
ABCA6Q8N139 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC33.9■■■■□ 3.02
ABCA6Q8N139 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
ABCA6Q8N139 LINC02228-203ENST00000641970 1355 ntBASIC33.9■■■■□ 3.02
ABCA6Q8N139 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC33.9■■■■□ 3.02
ABCA6Q8N139 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC33.9■■■■□ 3.02
ABCA6Q8N139 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC33.9■■■■□ 3.02
ABCA6Q8N139 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC33.89■■■■□ 3.02
ABCA6Q8N139 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC33.89■■■■□ 3.02
ABCA6Q8N139 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC33.89■■■■□ 3.02
ABCA6Q8N139 LSR-205ENST00000427250 1606 ntTSL 2 BASIC33.89■■■■□ 3.02
ABCA6Q8N139 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC33.89■■■■□ 3.02
ABCA6Q8N139 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC33.89■■■■□ 3.02
ABCA6Q8N139 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
ABCA6Q8N139 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC33.89■■■■□ 3.02
ABCA6Q8N139 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC33.89■■■■□ 3.02
ABCA6Q8N139 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
ABCA6Q8N139 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC33.88■■■■□ 3.01
ABCA6Q8N139 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
ABCA6Q8N139 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC33.88■■■■□ 3.01
ABCA6Q8N139 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC33.88■■■■□ 3.01
ABCA6Q8N139 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC33.88■■■■□ 3.01
ABCA6Q8N139 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC33.88■■■■□ 3.01
ABCA6Q8N139 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC33.88■■■■□ 3.01
ABCA6Q8N139 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
ABCA6Q8N139 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
ABCA6Q8N139 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC33.87■■■■□ 3.01
ABCA6Q8N139 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
ABCA6Q8N139 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
ABCA6Q8N139 CDCA4P2-201ENST00000441182 718 ntBASIC33.87■■■■□ 3.01
ABCA6Q8N139 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
ABCA6Q8N139 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC33.87■■■■□ 3.01
ABCA6Q8N139 AC080038.1-201ENST00000611274 1154 ntBASIC33.87■■■■□ 3.01
ABCA6Q8N139 GXYLT1P5-201ENST00000614548 1189 ntBASIC33.87■■■■□ 3.01
ABCA6Q8N139 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC33.87■■■■□ 3.01
ABCA6Q8N139 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC33.87■■■■□ 3.01
ABCA6Q8N139 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC33.87■■■■□ 3.01
ABCA6Q8N139 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC33.86■■■■□ 3.01
ABCA6Q8N139 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
ABCA6Q8N139 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
ABCA6Q8N139 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
ABCA6Q8N139 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC33.86■■■■□ 3.01
ABCA6Q8N139 TPRG1LP1-201ENST00000598702 760 ntBASIC33.86■■■■□ 3.01
ABCA6Q8N139 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC33.86■■■■□ 3.01
ABCA6Q8N139 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC33.85■■■■□ 3.01
ABCA6Q8N139 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
ABCA6Q8N139 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
ABCA6Q8N139 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC33.85■■■■□ 3.01
ABCA6Q8N139 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC33.85■■■■□ 3.01
ABCA6Q8N139 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC33.85■■■■□ 3.01
ABCA6Q8N139 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC33.85■■■■□ 3.01
ABCA6Q8N139 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC33.84■■■■□ 3.01
ABCA6Q8N139 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC33.84■■■■□ 3.01
ABCA6Q8N139 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC33.84■■■■□ 3.01
ABCA6Q8N139 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC33.84■■■■□ 3.01
ABCA6Q8N139 AL499627.2-201ENST00000606283 725 ntBASIC33.84■■■■□ 3.01
ABCA6Q8N139 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC33.84■■■■□ 3.01
ABCA6Q8N139 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC33.83■■■■□ 3.01
ABCA6Q8N139 LHPP-203ENST00000392757 840 ntTSL 3 BASIC33.83■■■■□ 3.01
ABCA6Q8N139 AP005435.1-201ENST00000529293 1178 ntBASIC33.83■■■■□ 3.01
ABCA6Q8N139 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC33.83■■■■□ 3.01
ABCA6Q8N139 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
ABCA6Q8N139 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
ABCA6Q8N139 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
ABCA6Q8N139 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC33.83■■■■□ 3.01
ABCA6Q8N139 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC33.83■■■■□ 3.01
ABCA6Q8N139 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms