Protein–RNA interactions for Protein: Q8IUA7

ABCA9, ATP-binding cassette sub-family A member 9, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9Q8IUA7 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC34.92■■■■□ 3.18
ABCA9Q8IUA7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
ABCA9Q8IUA7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
ABCA9Q8IUA7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC34.92■■■■□ 3.18
ABCA9Q8IUA7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
ABCA9Q8IUA7 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC34.92■■■■□ 3.18
ABCA9Q8IUA7 GXYLT1P5-201ENST00000614548 1189 ntBASIC34.92■■■■□ 3.18
ABCA9Q8IUA7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC34.92■■■■□ 3.18
ABCA9Q8IUA7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC34.92■■■■□ 3.18
ABCA9Q8IUA7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
ABCA9Q8IUA7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
ABCA9Q8IUA7 AC133637.1-201ENST00000624115 1537 ntBASIC34.91■■■■□ 3.18
ABCA9Q8IUA7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC34.9■■■■□ 3.18
ABCA9Q8IUA7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC34.9■■■■□ 3.18
ABCA9Q8IUA7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
ABCA9Q8IUA7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC34.9■■■■□ 3.18
ABCA9Q8IUA7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC34.9■■■■□ 3.18
ABCA9Q8IUA7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
ABCA9Q8IUA7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC34.89■■■■□ 3.18
ABCA9Q8IUA7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC34.89■■■■□ 3.18
ABCA9Q8IUA7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC34.89■■■■□ 3.18
ABCA9Q8IUA7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
ABCA9Q8IUA7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC34.89■■■■□ 3.18
ABCA9Q8IUA7 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC34.89■■■■□ 3.18
ABCA9Q8IUA7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC34.89■■■■□ 3.18
ABCA9Q8IUA7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC34.88■■■■□ 3.17
ABCA9Q8IUA7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC34.88■■■■□ 3.17
ABCA9Q8IUA7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC34.88■■■■□ 3.17
ABCA9Q8IUA7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC34.88■■■■□ 3.17
ABCA9Q8IUA7 TPRG1LP1-201ENST00000598702 760 ntBASIC34.88■■■■□ 3.17
ABCA9Q8IUA7 AL499627.2-201ENST00000606283 725 ntBASIC34.88■■■■□ 3.17
ABCA9Q8IUA7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC34.88■■■■□ 3.17
ABCA9Q8IUA7 AL161729.1-201ENST00000604104 1402 ntBASIC34.88■■■■□ 3.17
ABCA9Q8IUA7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC34.88■■■■□ 3.17
ABCA9Q8IUA7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
ABCA9Q8IUA7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
ABCA9Q8IUA7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
ABCA9Q8IUA7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC34.87■■■■□ 3.17
ABCA9Q8IUA7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC34.87■■■■□ 3.17
ABCA9Q8IUA7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
ABCA9Q8IUA7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
ABCA9Q8IUA7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC34.87■■■■□ 3.17
ABCA9Q8IUA7 GAS2L1P2-201ENST00000436355 1356 ntBASIC34.86■■■■□ 3.17
ABCA9Q8IUA7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC34.86■■■■□ 3.17
ABCA9Q8IUA7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC34.86■■■■□ 3.17
ABCA9Q8IUA7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC34.86■■■■□ 3.17
ABCA9Q8IUA7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC34.86■■■■□ 3.17
ABCA9Q8IUA7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC34.86■■■■□ 3.17
ABCA9Q8IUA7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
ABCA9Q8IUA7 ESRRAP2-201ENST00000418437 1549 ntBASIC34.85■■■■□ 3.17
ABCA9Q8IUA7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC34.85■■■■□ 3.17
ABCA9Q8IUA7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC34.85■■■■□ 3.17
ABCA9Q8IUA7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
ABCA9Q8IUA7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC34.85■■■■□ 3.17
ABCA9Q8IUA7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
ABCA9Q8IUA7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC34.84■■■■□ 3.17
ABCA9Q8IUA7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC34.84■■■■□ 3.17
ABCA9Q8IUA7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
ABCA9Q8IUA7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC34.84■■■■□ 3.17
ABCA9Q8IUA7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC34.84■■■■□ 3.17
ABCA9Q8IUA7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
ABCA9Q8IUA7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC34.84■■■■□ 3.17
ABCA9Q8IUA7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC34.84■■■■□ 3.17
ABCA9Q8IUA7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC34.84■■■■□ 3.17
ABCA9Q8IUA7 AP005435.1-201ENST00000529293 1178 ntBASIC34.84■■■■□ 3.17
ABCA9Q8IUA7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
ABCA9Q8IUA7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC34.83■■■■□ 3.17
ABCA9Q8IUA7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC34.83■■■■□ 3.17
ABCA9Q8IUA7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC34.83■■■■□ 3.17
ABCA9Q8IUA7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC34.83■■■■□ 3.17
ABCA9Q8IUA7 HSCB-202ENST00000398941 955 ntTSL 2 BASIC34.83■■■■□ 3.17
ABCA9Q8IUA7 AC016769.1-201ENST00000409132 1010 ntBASIC34.83■■■■□ 3.17
ABCA9Q8IUA7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC34.83■■■■□ 3.17
ABCA9Q8IUA7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC34.83■■■■□ 3.17
ABCA9Q8IUA7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC34.83■■■■□ 3.17
ABCA9Q8IUA7 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC34.82■■■■□ 3.17
ABCA9Q8IUA7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC34.82■■■■□ 3.17
ABCA9Q8IUA7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC34.82■■■■□ 3.16
ABCA9Q8IUA7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC34.82■■■■□ 3.16
ABCA9Q8IUA7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC34.82■■■■□ 3.16
ABCA9Q8IUA7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
ABCA9Q8IUA7 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC34.82■■■■□ 3.16
ABCA9Q8IUA7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC34.82■■■■□ 3.16
ABCA9Q8IUA7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC34.82■■■■□ 3.16
ABCA9Q8IUA7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
ABCA9Q8IUA7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
ABCA9Q8IUA7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC34.81■■■■□ 3.16
ABCA9Q8IUA7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC34.81■■■■□ 3.16
ABCA9Q8IUA7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC34.81■■■■□ 3.16
ABCA9Q8IUA7 PPP1R14BP3-201ENST00000509033 445 ntBASIC34.81■■■■□ 3.16
ABCA9Q8IUA7 AC137761.2-201ENST00000561729 223 ntBASIC34.81■■■■□ 3.16
ABCA9Q8IUA7 AC145350.3-201ENST00000569033 163 ntBASIC34.81■■■■□ 3.16
ABCA9Q8IUA7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC34.81■■■■□ 3.16
ABCA9Q8IUA7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC34.81■■■■□ 3.16
ABCA9Q8IUA7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC34.81■■■■□ 3.16
ABCA9Q8IUA7 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC34.81■■■■□ 3.16
ABCA9Q8IUA7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC34.81■■■■□ 3.16
ABCA9Q8IUA7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC34.81■■■■□ 3.16
ABCA9Q8IUA7 AC026185.1-201ENST00000445748 174 ntBASIC34.81■■■■□ 3.16
ABCA9Q8IUA7 DBI-210ENST00000542275 757 ntTSL 5 BASIC34.81■■■■□ 3.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms