Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC25Q86WR0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC25Q86WR0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC25Q86WR0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC25Q86WR0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CCDC25Q86WR0 RNF126P1-201ENST00000567452 1320 ntBASIC23.13■■□□□ 1.29
CCDC25Q86WR0 ALDH1A3-203ENST00000557963 1670 ntBASIC23.13■■□□□ 1.29
CCDC25Q86WR0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC25Q86WR0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC25Q86WR0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CCDC25Q86WR0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.13■■□□□ 1.29
CCDC25Q86WR0 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC25Q86WR0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.13■■□□□ 1.29
CCDC25Q86WR0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
CCDC25Q86WR0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC25Q86WR0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC25Q86WR0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCDC25Q86WR0 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC25Q86WR0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC25Q86WR0 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.12■■□□□ 1.29
CCDC25Q86WR0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC25Q86WR0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC25Q86WR0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.12■■□□□ 1.29
CCDC25Q86WR0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC25Q86WR0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC25Q86WR0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.12■■□□□ 1.29
CCDC25Q86WR0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC25Q86WR0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC25Q86WR0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCDC25Q86WR0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.12■■□□□ 1.29
CCDC25Q86WR0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC23.11■■□□□ 1.29
CCDC25Q86WR0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC25Q86WR0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
CCDC25Q86WR0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.11■■□□□ 1.29
CCDC25Q86WR0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.11■■□□□ 1.29
CCDC25Q86WR0 AC131274.2-201ENST00000580697 1507 ntBASIC23.11■■□□□ 1.29
CCDC25Q86WR0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC25Q86WR0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC25Q86WR0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.11■■□□□ 1.29
CCDC25Q86WR0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CCDC25Q86WR0 ECEL1P1-201ENST00000373592 1742 ntBASIC23.11■■□□□ 1.29
CCDC25Q86WR0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CCDC25Q86WR0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC25Q86WR0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC23.1■■□□□ 1.29
CCDC25Q86WR0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC25Q86WR0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CCDC25Q86WR0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
CCDC25Q86WR0 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC25Q86WR0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
CCDC25Q86WR0 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
CCDC25Q86WR0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC25Q86WR0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC25Q86WR0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCDC25Q86WR0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCDC25Q86WR0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCDC25Q86WR0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.09■■□□□ 1.29
CCDC25Q86WR0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.09■■□□□ 1.29
CCDC25Q86WR0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCDC25Q86WR0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.09■■□□□ 1.29
CCDC25Q86WR0 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CCDC25Q86WR0 ABHD17AP3-201ENST00000503096 1137 ntBASIC23.09■■□□□ 1.29
CCDC25Q86WR0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CCDC25Q86WR0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CCDC25Q86WR0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CCDC25Q86WR0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CCDC25Q86WR0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCDC25Q86WR0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCDC25Q86WR0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCDC25Q86WR0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCDC25Q86WR0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.08■■□□□ 1.29
CCDC25Q86WR0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCDC25Q86WR0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCDC25Q86WR0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCDC25Q86WR0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CCDC25Q86WR0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCDC25Q86WR0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CCDC25Q86WR0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CCDC25Q86WR0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
CCDC25Q86WR0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.08■■□□□ 1.28
CCDC25Q86WR0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
CCDC25Q86WR0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
CCDC25Q86WR0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
CCDC25Q86WR0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC25Q86WR0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC25Q86WR0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC25Q86WR0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC25Q86WR0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CCDC25Q86WR0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.06■■□□□ 1.28
CCDC25Q86WR0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.06■■□□□ 1.28
CCDC25Q86WR0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC25Q86WR0 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.06■■□□□ 1.28
CCDC25Q86WR0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
CCDC25Q86WR0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.06■■□□□ 1.28
CCDC25Q86WR0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.06■■□□□ 1.28
CCDC25Q86WR0 LONRF2P2-201ENST00000439212 571 ntBASIC23.06■■□□□ 1.28
CCDC25Q86WR0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.06■■□□□ 1.28
CCDC25Q86WR0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC23.06■■□□□ 1.28
CCDC25Q86WR0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.06■■□□□ 1.28
CCDC25Q86WR0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCDC25Q86WR0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms