Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF546Q86UE3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF546Q86UE3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF546Q86UE3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF546Q86UE3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF546Q86UE3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF546Q86UE3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF546Q86UE3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF546Q86UE3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF546Q86UE3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF546Q86UE3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF546Q86UE3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ZNF546Q86UE3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF546Q86UE3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF546Q86UE3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ZNF546Q86UE3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.65■□□□□ 0.58
ZNF546Q86UE3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.65■□□□□ 0.58
ZNF546Q86UE3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF546Q86UE3 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF546Q86UE3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF546Q86UE3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ZNF546Q86UE3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF546Q86UE3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF546Q86UE3 FBXW4P1-201ENST00000426721 2239 ntBASIC18.65■□□□□ 0.58
ZNF546Q86UE3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF546Q86UE3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF546Q86UE3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF546Q86UE3 AC126177.7-201ENST00000547904 679 ntBASIC18.64■□□□□ 0.57
ZNF546Q86UE3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.64■□□□□ 0.57
ZNF546Q86UE3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF546Q86UE3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF546Q86UE3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF546Q86UE3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF546Q86UE3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ZNF546Q86UE3 AC092053.2-201ENST00000640557 1818 ntBASIC18.63■□□□□ 0.57
ZNF546Q86UE3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF546Q86UE3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF546Q86UE3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF546Q86UE3 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNF546Q86UE3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
ZNF546Q86UE3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.63■□□□□ 0.57
ZNF546Q86UE3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF546Q86UE3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF546Q86UE3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.63■□□□□ 0.57
ZNF546Q86UE3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF546Q86UE3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF546Q86UE3 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF546Q86UE3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF546Q86UE3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF546Q86UE3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF546Q86UE3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF546Q86UE3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF546Q86UE3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF546Q86UE3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF546Q86UE3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF546Q86UE3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.62■□□□□ 0.57
ZNF546Q86UE3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF546Q86UE3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ZNF546Q86UE3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZNF546Q86UE3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
ZNF546Q86UE3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF546Q86UE3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
ZNF546Q86UE3 DUX4L11-201ENST00000611504 1267 ntBASIC18.61■□□□□ 0.57
ZNF546Q86UE3 DUX4L12-201ENST00000614593 1267 ntBASIC18.61■□□□□ 0.57
ZNF546Q86UE3 DUX4L14-201ENST00000621227 1267 ntBASIC18.61■□□□□ 0.57
ZNF546Q86UE3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF546Q86UE3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF546Q86UE3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZNF546Q86UE3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF546Q86UE3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ZNF546Q86UE3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF546Q86UE3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF546Q86UE3 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF546Q86UE3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
ZNF546Q86UE3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF546Q86UE3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF546Q86UE3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF546Q86UE3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF546Q86UE3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ZNF546Q86UE3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
ZNF546Q86UE3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF546Q86UE3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF546Q86UE3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ZNF546Q86UE3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
ZNF546Q86UE3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF546Q86UE3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF546Q86UE3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF546Q86UE3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF546Q86UE3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF546Q86UE3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF546Q86UE3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF546Q86UE3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZNF546Q86UE3 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF546Q86UE3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF546Q86UE3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZNF546Q86UE3 AC092667.1-201ENST00000434301 2586 ntBASIC18.59■□□□□ 0.57
ZNF546Q86UE3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF546Q86UE3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ZNF546Q86UE3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF546Q86UE3 AC026310.3-201ENST00000625186 2373 ntBASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms