Protein–RNA interactions for Protein: Q7RTT4

SSX8, Protein SSX8, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX8Q7RTT4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSX8Q7RTT4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.5■□□□□ 0.71
SSX8Q7RTT4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSX8Q7RTT4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.5■□□□□ 0.71
SSX8Q7RTT4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX8Q7RTT4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SSX8Q7RTT4 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
SSX8Q7RTT4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX8Q7RTT4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX8Q7RTT4 LINC01529-204ENST00000636474 1715 ntBASIC19.49■□□□□ 0.71
SSX8Q7RTT4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX8Q7RTT4 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SSX8Q7RTT4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SSX8Q7RTT4 AC233992.3-201ENST00000607491 485 ntBASIC19.49■□□□□ 0.71
SSX8Q7RTT4 AC144652.1-201ENST00000609974 1624 ntBASIC19.49■□□□□ 0.71
SSX8Q7RTT4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSX8Q7RTT4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX8Q7RTT4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX8Q7RTT4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSX8Q7RTT4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SSX8Q7RTT4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX8Q7RTT4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.48■□□□□ 0.71
SSX8Q7RTT4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.48■□□□□ 0.71
SSX8Q7RTT4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSX8Q7RTT4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SSX8Q7RTT4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SSX8Q7RTT4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX8Q7RTT4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSX8Q7RTT4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SSX8Q7RTT4 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SSX8Q7RTT4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX8Q7RTT4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSX8Q7RTT4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX8Q7RTT4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSX8Q7RTT4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSX8Q7RTT4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.46■□□□□ 0.71
SSX8Q7RTT4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX8Q7RTT4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.46■□□□□ 0.71
SSX8Q7RTT4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSX8Q7RTT4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SSX8Q7RTT4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SSX8Q7RTT4 AC006455.2-201ENST00000429931 906 ntBASIC19.46■□□□□ 0.71
SSX8Q7RTT4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.46■□□□□ 0.71
SSX8Q7RTT4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX8Q7RTT4 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX8Q7RTT4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX8Q7RTT4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SSX8Q7RTT4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SSX8Q7RTT4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 CA15P2-201ENST00000611168 834 ntBASIC19.44■□□□□ 0.7
SSX8Q7RTT4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
SSX8Q7RTT4 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SSX8Q7RTT4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSX8Q7RTT4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX8Q7RTT4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX8Q7RTT4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX8Q7RTT4 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
SSX8Q7RTT4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX8Q7RTT4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.43■□□□□ 0.7
SSX8Q7RTT4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SSX8Q7RTT4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX8Q7RTT4 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SSX8Q7RTT4 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SSX8Q7RTT4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX8Q7RTT4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX8Q7RTT4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SSX8Q7RTT4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SSX8Q7RTT4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms