Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
LCA10Q71F78 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
LCA10Q71F78 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
LCA10Q71F78 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC12.03□□□□□ -0.48
LCA10Q71F78 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
LCA10Q71F78 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LCA10Q71F78 NFE2L3P1-201ENST00000588207 1959 ntBASIC12.03□□□□□ -0.48
LCA10Q71F78 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
LCA10Q71F78 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
LCA10Q71F78 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
LCA10Q71F78 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
LCA10Q71F78 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC12.02□□□□□ -0.48
LCA10Q71F78 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
LCA10Q71F78 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
LCA10Q71F78 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC12.02□□□□□ -0.49
LCA10Q71F78 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC12.02□□□□□ -0.49
LCA10Q71F78 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC12.02□□□□□ -0.49
LCA10Q71F78 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
LCA10Q71F78 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC12.02□□□□□ -0.49
LCA10Q71F78 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
LCA10Q71F78 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LCA10Q71F78 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LCA10Q71F78 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC12.02□□□□□ -0.49
LCA10Q71F78 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LCA10Q71F78 RARG-204ENST00000543726 1779 ntTSL 2 BASIC12.02□□□□□ -0.49
LCA10Q71F78 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC12.02□□□□□ -0.49
LCA10Q71F78 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
LCA10Q71F78 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LCA10Q71F78 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LCA10Q71F78 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
LCA10Q71F78 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
LCA10Q71F78 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC12.01□□□□□ -0.49
LCA10Q71F78 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC12.01□□□□□ -0.49
LCA10Q71F78 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LCA10Q71F78 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LCA10Q71F78 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC12.01□□□□□ -0.49
LCA10Q71F78 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LCA10Q71F78 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC12.01□□□□□ -0.49
LCA10Q71F78 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC12.01□□□□□ -0.49
LCA10Q71F78 AL020996.1-203ENST00000536896 2307 ntBASIC12.01□□□□□ -0.49
LCA10Q71F78 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LCA10Q71F78 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC12.01□□□□□ -0.49
LCA10Q71F78 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LCA10Q71F78 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LCA10Q71F78 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LCA10Q71F78 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LCA10Q71F78 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LCA10Q71F78 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LCA10Q71F78 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
LCA10Q71F78 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
LCA10Q71F78 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LCA10Q71F78 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LCA10Q71F78 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LCA10Q71F78 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC12□□□□□ -0.49
LCA10Q71F78 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC12□□□□□ -0.49
LCA10Q71F78 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LCA10Q71F78 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LCA10Q71F78 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
LCA10Q71F78 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
LCA10Q71F78 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
LCA10Q71F78 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
LCA10Q71F78 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LCA10Q71F78 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LCA10Q71F78 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
LCA10Q71F78 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC12□□□□□ -0.49
LCA10Q71F78 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC12□□□□□ -0.49
LCA10Q71F78 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
LCA10Q71F78 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LCA10Q71F78 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
LCA10Q71F78 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LCA10Q71F78 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC12□□□□□ -0.49
LCA10Q71F78 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC12□□□□□ -0.49
LCA10Q71F78 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LCA10Q71F78 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LCA10Q71F78 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LCA10Q71F78 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
LCA10Q71F78 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC11.99□□□□□ -0.49
LCA10Q71F78 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
LCA10Q71F78 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
LCA10Q71F78 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
LCA10Q71F78 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC11.99□□□□□ -0.49
LCA10Q71F78 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LCA10Q71F78 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC11.99□□□□□ -0.49
LCA10Q71F78 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC11.99□□□□□ -0.49
LCA10Q71F78 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LCA10Q71F78 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC11.99□□□□□ -0.49
LCA10Q71F78 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LCA10Q71F78 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC11.99□□□□□ -0.49
LCA10Q71F78 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC11.99□□□□□ -0.49
LCA10Q71F78 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LCA10Q71F78 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
LCA10Q71F78 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC11.99□□□□□ -0.49
LCA10Q71F78 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LCA10Q71F78 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
LCA10Q71F78 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LCA10Q71F78 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
LCA10Q71F78 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
LCA10Q71F78 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LCA10Q71F78 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
LCA10Q71F78 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms