Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
RAPH1Q70E73 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAPH1Q70E73 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAPH1Q70E73 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.49■■□□□ 1.19
RAPH1Q70E73 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RAPH1Q70E73 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
RAPH1Q70E73 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAPH1Q70E73 TSPY13P-201ENST00000338964 914 ntBASIC22.49■■□□□ 1.19
RAPH1Q70E73 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RAPH1Q70E73 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.49■■□□□ 1.19
RAPH1Q70E73 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
RAPH1Q70E73 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAPH1Q70E73 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAPH1Q70E73 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAPH1Q70E73 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RAPH1Q70E73 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.48■■□□□ 1.19
RAPH1Q70E73 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RAPH1Q70E73 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
RAPH1Q70E73 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPH1Q70E73 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RAPH1Q70E73 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RAPH1Q70E73 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPH1Q70E73 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.48■■□□□ 1.19
RAPH1Q70E73 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.48■■□□□ 1.19
RAPH1Q70E73 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.48■■□□□ 1.19
RAPH1Q70E73 PVT1_1.1-201ENST00000615125 194 ntBASIC22.48■■□□□ 1.19
RAPH1Q70E73 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.48■■□□□ 1.19
RAPH1Q70E73 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RAPH1Q70E73 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAPH1Q70E73 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.47■■□□□ 1.19
RAPH1Q70E73 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.47■■□□□ 1.19
RAPH1Q70E73 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAPH1Q70E73 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAPH1Q70E73 KRT18P24-201ENST00000344739 1156 ntBASIC22.47■■□□□ 1.19
RAPH1Q70E73 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RAPH1Q70E73 MIR4281-201ENST00000580852 62 ntBASIC22.47■■□□□ 1.19
RAPH1Q70E73 AC233723.2-201ENST00000623798 2106 ntBASIC22.47■■□□□ 1.19
RAPH1Q70E73 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RAPH1Q70E73 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RAPH1Q70E73 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RAPH1Q70E73 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RAPH1Q70E73 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
RAPH1Q70E73 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAPH1Q70E73 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
RAPH1Q70E73 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAPH1Q70E73 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
RAPH1Q70E73 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.46■■□□□ 1.19
RAPH1Q70E73 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
RAPH1Q70E73 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAPH1Q70E73 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAPH1Q70E73 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.46■■□□□ 1.19
RAPH1Q70E73 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RAPH1Q70E73 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RAPH1Q70E73 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RAPH1Q70E73 C1orf229-201ENST00000623686 2258 ntBASIC22.46■■□□□ 1.19
RAPH1Q70E73 AF131216.4-201ENST00000638924 1588 ntBASIC22.46■■□□□ 1.19
RAPH1Q70E73 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RAPH1Q70E73 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAPH1Q70E73 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RAPH1Q70E73 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.45■■□□□ 1.18
RAPH1Q70E73 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.45■■□□□ 1.18
RAPH1Q70E73 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RAPH1Q70E73 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RAPH1Q70E73 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RAPH1Q70E73 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RAPH1Q70E73 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RAPH1Q70E73 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RAPH1Q70E73 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.44■■□□□ 1.18
RAPH1Q70E73 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.44■■□□□ 1.18
RAPH1Q70E73 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.44■■□□□ 1.18
RAPH1Q70E73 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.44■■□□□ 1.18
RAPH1Q70E73 AL117328.2-201ENST00000624617 1940 ntBASIC22.44■■□□□ 1.18
RAPH1Q70E73 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RAPH1Q70E73 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RAPH1Q70E73 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RAPH1Q70E73 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
RAPH1Q70E73 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
RAPH1Q70E73 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RAPH1Q70E73 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RAPH1Q70E73 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
RAPH1Q70E73 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.43■■□□□ 1.18
RAPH1Q70E73 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.43■■□□□ 1.18
RAPH1Q70E73 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RAPH1Q70E73 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RAPH1Q70E73 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RAPH1Q70E73 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RAPH1Q70E73 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RAPH1Q70E73 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.43■■□□□ 1.18
RAPH1Q70E73 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.43■■□□□ 1.18
RAPH1Q70E73 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RAPH1Q70E73 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RAPH1Q70E73 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.42■■□□□ 1.18
RAPH1Q70E73 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.42■■□□□ 1.18
RAPH1Q70E73 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.42■■□□□ 1.18
RAPH1Q70E73 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
RAPH1Q70E73 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RAPH1Q70E73 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RAPH1Q70E73 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RAPH1Q70E73 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.41■■□□□ 1.18
RAPH1Q70E73 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms