Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
VPS13CQ709C8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS13CQ709C8 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.97■□□□□ 0.63
VPS13CQ709C8 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS13CQ709C8 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS13CQ709C8 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
VPS13CQ709C8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS13CQ709C8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS13CQ709C8 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS13CQ709C8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
VPS13CQ709C8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VPS13CQ709C8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS13CQ709C8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS13CQ709C8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.96■□□□□ 0.63
VPS13CQ709C8 AC245100.8-202ENST00000629247 1058 ntBASIC18.96■□□□□ 0.63
VPS13CQ709C8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS13CQ709C8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.96■□□□□ 0.63
VPS13CQ709C8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
VPS13CQ709C8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS13CQ709C8 AC092803.2-201ENST00000564287 1899 ntBASIC18.96■□□□□ 0.63
VPS13CQ709C8 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VPS13CQ709C8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VPS13CQ709C8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.96■□□□□ 0.63
VPS13CQ709C8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.96■□□□□ 0.63
VPS13CQ709C8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.96■□□□□ 0.63
VPS13CQ709C8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VPS13CQ709C8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS13CQ709C8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS13CQ709C8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
VPS13CQ709C8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.95■□□□□ 0.62
VPS13CQ709C8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VPS13CQ709C8 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.95■□□□□ 0.62
VPS13CQ709C8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS13CQ709C8 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.95■□□□□ 0.62
VPS13CQ709C8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VPS13CQ709C8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.95■□□□□ 0.62
VPS13CQ709C8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.95■□□□□ 0.62
VPS13CQ709C8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
VPS13CQ709C8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS13CQ709C8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS13CQ709C8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
VPS13CQ709C8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS13CQ709C8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS13CQ709C8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS13CQ709C8 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.94■□□□□ 0.62
VPS13CQ709C8 AC126544.1-201ENST00000580842 1059 ntBASIC18.94■□□□□ 0.62
VPS13CQ709C8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
VPS13CQ709C8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS13CQ709C8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS13CQ709C8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS13CQ709C8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS13CQ709C8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS13CQ709C8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS13CQ709C8 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS13CQ709C8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS13CQ709C8 GUSBP6-202ENST00000438529 1198 ntBASIC18.93■□□□□ 0.62
VPS13CQ709C8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VPS13CQ709C8 NTF6G-201ENST00000591094 616 ntBASIC18.93■□□□□ 0.62
VPS13CQ709C8 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS13CQ709C8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VPS13CQ709C8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.93■□□□□ 0.62
VPS13CQ709C8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS13CQ709C8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS13CQ709C8 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
VPS13CQ709C8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VPS13CQ709C8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VPS13CQ709C8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS13CQ709C8 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
VPS13CQ709C8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS13CQ709C8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS13CQ709C8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS13CQ709C8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS13CQ709C8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
VPS13CQ709C8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.92■□□□□ 0.62
VPS13CQ709C8 IGHV3-19-201ENST00000521488 291 ntBASIC18.92■□□□□ 0.62
VPS13CQ709C8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.92■□□□□ 0.62
VPS13CQ709C8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS13CQ709C8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS13CQ709C8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.91■□□□□ 0.62
VPS13CQ709C8 AC066615.1-201ENST00000640911 628 ntBASIC18.91■□□□□ 0.62
VPS13CQ709C8 HLA-L-211ENST00000482052 1765 ntBASIC18.91■□□□□ 0.62
VPS13CQ709C8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS13CQ709C8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS13CQ709C8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
VPS13CQ709C8 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS13CQ709C8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS13CQ709C8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS13CQ709C8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS13CQ709C8 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.91■□□□□ 0.62
VPS13CQ709C8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS13CQ709C8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
VPS13CQ709C8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
VPS13CQ709C8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS13CQ709C8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS13CQ709C8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS13CQ709C8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.9■□□□□ 0.62
VPS13CQ709C8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS13CQ709C8 MIR6084-201ENST00000622012 110 ntBASIC18.9■□□□□ 0.62
VPS13CQ709C8 AC073111.5-205ENST00000641717 521 ntBASIC18.9■□□□□ 0.62
VPS13CQ709C8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms