Protein–RNA interactions for Protein: Q6ZMV5

PPP4R3CP, Putative SMEK homolog 3, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3CPQ6ZMV5 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC25.37■■□□□ 1.65
PPP4R3CPQ6ZMV5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.37■■□□□ 1.65
PPP4R3CPQ6ZMV5 MIR6724-1-201ENST00000616420 92 ntBASIC25.37■■□□□ 1.65
PPP4R3CPQ6ZMV5 MIR6724-2-201ENST00000616483 92 ntBASIC25.37■■□□□ 1.65
PPP4R3CPQ6ZMV5 MIR6724-4-201ENST00000617390 92 ntBASIC25.37■■□□□ 1.65
PPP4R3CPQ6ZMV5 MIR6724-3-201ENST00000622482 92 ntBASIC25.37■■□□□ 1.65
PPP4R3CPQ6ZMV5 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.37■■□□□ 1.65
PPP4R3CPQ6ZMV5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PPP4R3CPQ6ZMV5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PPP4R3CPQ6ZMV5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PPP4R3CPQ6ZMV5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.37■■□□□ 1.65
PPP4R3CPQ6ZMV5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PPP4R3CPQ6ZMV5 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.36■■□□□ 1.65
PPP4R3CPQ6ZMV5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PPP4R3CPQ6ZMV5 AL355816.2-201ENST00000610049 647 ntBASIC25.36■■□□□ 1.65
PPP4R3CPQ6ZMV5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.36■■□□□ 1.65
PPP4R3CPQ6ZMV5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC25.36■■□□□ 1.65
PPP4R3CPQ6ZMV5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PPP4R3CPQ6ZMV5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PPP4R3CPQ6ZMV5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PPP4R3CPQ6ZMV5 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PPP4R3CPQ6ZMV5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.35■■□□□ 1.65
PPP4R3CPQ6ZMV5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PPP4R3CPQ6ZMV5 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
PPP4R3CPQ6ZMV5 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
PPP4R3CPQ6ZMV5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC25.35■■□□□ 1.65
PPP4R3CPQ6ZMV5 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PPP4R3CPQ6ZMV5 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
PPP4R3CPQ6ZMV5 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.34■■□□□ 1.65
PPP4R3CPQ6ZMV5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PPP4R3CPQ6ZMV5 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC25.34■■□□□ 1.65
PPP4R3CPQ6ZMV5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC25.34■■□□□ 1.65
PPP4R3CPQ6ZMV5 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PPP4R3CPQ6ZMV5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PPP4R3CPQ6ZMV5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC25.33■■□□□ 1.65
PPP4R3CPQ6ZMV5 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PPP4R3CPQ6ZMV5 AC131274.2-201ENST00000580697 1507 ntBASIC25.33■■□□□ 1.65
PPP4R3CPQ6ZMV5 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PPP4R3CPQ6ZMV5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PPP4R3CPQ6ZMV5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PPP4R3CPQ6ZMV5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.33■■□□□ 1.65
PPP4R3CPQ6ZMV5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC25.33■■□□□ 1.65
PPP4R3CPQ6ZMV5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.33■■□□□ 1.65
PPP4R3CPQ6ZMV5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PPP4R3CPQ6ZMV5 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.33■■□□□ 1.64
PPP4R3CPQ6ZMV5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
PPP4R3CPQ6ZMV5 AC073115.1-201ENST00000436056 532 ntTSL 4 BASIC25.32■■□□□ 1.64
PPP4R3CPQ6ZMV5 DUT-205ENST00000558813 769 ntTSL 2 BASIC25.32■■□□□ 1.64
PPP4R3CPQ6ZMV5 AC008147.4-201ENST00000617570 1204 ntBASIC25.32■■□□□ 1.64
PPP4R3CPQ6ZMV5 ABCB10P4-201ENST00000566803 2184 ntBASIC25.32■■□□□ 1.64
PPP4R3CPQ6ZMV5 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PPP4R3CPQ6ZMV5 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PPP4R3CPQ6ZMV5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PPP4R3CPQ6ZMV5 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.32■■□□□ 1.64
PPP4R3CPQ6ZMV5 CD72-202ENST00000378430 585 ntTSL 3 BASIC25.31■■□□□ 1.64
PPP4R3CPQ6ZMV5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.31■■□□□ 1.64
PPP4R3CPQ6ZMV5 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC25.31■■□□□ 1.64
PPP4R3CPQ6ZMV5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.31■■□□□ 1.64
PPP4R3CPQ6ZMV5 AL117332.1-201ENST00000622628 974 ntBASIC25.31■■□□□ 1.64
PPP4R3CPQ6ZMV5 GAPDHP74-202ENST00000632456 782 ntBASIC25.31■■□□□ 1.64
PPP4R3CPQ6ZMV5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PPP4R3CPQ6ZMV5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
PPP4R3CPQ6ZMV5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PPP4R3CPQ6ZMV5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.3■■□□□ 1.64
PPP4R3CPQ6ZMV5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PPP4R3CPQ6ZMV5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.3■■□□□ 1.64
PPP4R3CPQ6ZMV5 MIR3621-201ENST00000580529 85 ntBASIC25.3■■□□□ 1.64
PPP4R3CPQ6ZMV5 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC25.3■■□□□ 1.64
PPP4R3CPQ6ZMV5 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC25.3■■□□□ 1.64
PPP4R3CPQ6ZMV5 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC25.3■■□□□ 1.64
PPP4R3CPQ6ZMV5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PPP4R3CPQ6ZMV5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PPP4R3CPQ6ZMV5 AL022069.1-201ENST00000568025 1636 ntBASIC25.3■■□□□ 1.64
PPP4R3CPQ6ZMV5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PPP4R3CPQ6ZMV5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PPP4R3CPQ6ZMV5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
PPP4R3CPQ6ZMV5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PPP4R3CPQ6ZMV5 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PPP4R3CPQ6ZMV5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PPP4R3CPQ6ZMV5 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC25.29■■□□□ 1.64
PPP4R3CPQ6ZMV5 AC090079.2-201ENST00000575289 768 ntBASIC25.29■■□□□ 1.64
PPP4R3CPQ6ZMV5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PPP4R3CPQ6ZMV5 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
PPP4R3CPQ6ZMV5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.29■■□□□ 1.64
PPP4R3CPQ6ZMV5 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PPP4R3CPQ6ZMV5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PPP4R3CPQ6ZMV5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.28■■□□□ 1.64
PPP4R3CPQ6ZMV5 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
PPP4R3CPQ6ZMV5 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC25.28■■□□□ 1.64
PPP4R3CPQ6ZMV5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC25.28■■□□□ 1.64
PPP4R3CPQ6ZMV5 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC25.27■■□□□ 1.64
PPP4R3CPQ6ZMV5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
PPP4R3CPQ6ZMV5 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.27■■□□□ 1.64
PPP4R3CPQ6ZMV5 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
PPP4R3CPQ6ZMV5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PPP4R3CPQ6ZMV5 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC25.27■■□□□ 1.64
PPP4R3CPQ6ZMV5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PPP4R3CPQ6ZMV5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PPP4R3CPQ6ZMV5 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PPP4R3CPQ6ZMV5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms