Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CNKSR3Q6P9H4 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CNKSR3Q6P9H4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.54■■□□□ 1.52
CNKSR3Q6P9H4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
CNKSR3Q6P9H4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CNKSR3Q6P9H4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CNKSR3Q6P9H4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.53■■□□□ 1.52
CNKSR3Q6P9H4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CNKSR3Q6P9H4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
CNKSR3Q6P9H4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CNKSR3Q6P9H4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.53■■□□□ 1.52
CNKSR3Q6P9H4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CNKSR3Q6P9H4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.53■■□□□ 1.52
CNKSR3Q6P9H4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CNKSR3Q6P9H4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CNKSR3Q6P9H4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CNKSR3Q6P9H4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CNKSR3Q6P9H4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.52■■□□□ 1.52
CNKSR3Q6P9H4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CNKSR3Q6P9H4 NTF6G-201ENST00000591094 616 ntBASIC24.52■■□□□ 1.52
CNKSR3Q6P9H4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.52■■□□□ 1.52
CNKSR3Q6P9H4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.52■■□□□ 1.52
CNKSR3Q6P9H4 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CNKSR3Q6P9H4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CNKSR3Q6P9H4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CNKSR3Q6P9H4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
CNKSR3Q6P9H4 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
CNKSR3Q6P9H4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
CNKSR3Q6P9H4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CNKSR3Q6P9H4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CNKSR3Q6P9H4 KRT18P14-201ENST00000534205 1250 ntBASIC24.51■■□□□ 1.51
CNKSR3Q6P9H4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CNKSR3Q6P9H4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.51■■□□□ 1.51
CNKSR3Q6P9H4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CNKSR3Q6P9H4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CNKSR3Q6P9H4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CNKSR3Q6P9H4 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
CNKSR3Q6P9H4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.5■■□□□ 1.51
CNKSR3Q6P9H4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CNKSR3Q6P9H4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CNKSR3Q6P9H4 ID1-201ENST00000376105 1233 ntBASIC24.5■■□□□ 1.51
CNKSR3Q6P9H4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.5■■□□□ 1.51
CNKSR3Q6P9H4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC24.5■■□□□ 1.51
CNKSR3Q6P9H4 TERF1P2-201ENST00000583350 1212 ntBASIC24.5■■□□□ 1.51
CNKSR3Q6P9H4 AL499627.2-201ENST00000606283 725 ntBASIC24.5■■□□□ 1.51
CNKSR3Q6P9H4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CNKSR3Q6P9H4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CNKSR3Q6P9H4 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.49■■□□□ 1.51
CNKSR3Q6P9H4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CNKSR3Q6P9H4 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC24.49■■□□□ 1.51
CNKSR3Q6P9H4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
CNKSR3Q6P9H4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CNKSR3Q6P9H4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.49■■□□□ 1.51
CNKSR3Q6P9H4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.49■■□□□ 1.51
CNKSR3Q6P9H4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.49■■□□□ 1.51
CNKSR3Q6P9H4 LINC02228-203ENST00000641970 1355 ntBASIC24.49■■□□□ 1.51
CNKSR3Q6P9H4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
CNKSR3Q6P9H4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CNKSR3Q6P9H4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CNKSR3Q6P9H4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
CNKSR3Q6P9H4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.48■■□□□ 1.51
CNKSR3Q6P9H4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.48■■□□□ 1.51
CNKSR3Q6P9H4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.48■■□□□ 1.51
CNKSR3Q6P9H4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.47■■□□□ 1.51
CNKSR3Q6P9H4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC24.47■■□□□ 1.51
CNKSR3Q6P9H4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
CNKSR3Q6P9H4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.47■■□□□ 1.51
CNKSR3Q6P9H4 OR2I1P-207ENST00000453522 948 ntBASIC24.47■■□□□ 1.51
CNKSR3Q6P9H4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CNKSR3Q6P9H4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.47■■□□□ 1.51
CNKSR3Q6P9H4 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CNKSR3Q6P9H4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.47■■□□□ 1.51
CNKSR3Q6P9H4 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.47■■□□□ 1.51
CNKSR3Q6P9H4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CNKSR3Q6P9H4 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CNKSR3Q6P9H4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CNKSR3Q6P9H4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CNKSR3Q6P9H4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.46■■□□□ 1.51
CNKSR3Q6P9H4 AC010525.1-201ENST00000585559 441 ntBASIC24.46■■□□□ 1.51
CNKSR3Q6P9H4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.46■■□□□ 1.51
CNKSR3Q6P9H4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CNKSR3Q6P9H4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.46■■□□□ 1.51
CNKSR3Q6P9H4 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CNKSR3Q6P9H4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CNKSR3Q6P9H4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
CNKSR3Q6P9H4 AC145676.1-201ENST00000514988 2004 ntBASIC24.45■■□□□ 1.51
CNKSR3Q6P9H4 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.45■■□□□ 1.51
CNKSR3Q6P9H4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CNKSR3Q6P9H4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CNKSR3Q6P9H4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.45■■□□□ 1.5
CNKSR3Q6P9H4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CNKSR3Q6P9H4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CNKSR3Q6P9H4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.45■■□□□ 1.5
CNKSR3Q6P9H4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CNKSR3Q6P9H4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CNKSR3Q6P9H4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CNKSR3Q6P9H4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.45■■□□□ 1.5
CNKSR3Q6P9H4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
CNKSR3Q6P9H4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CNKSR3Q6P9H4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms