Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
DEPDC1Q5TB30 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.68■■□□□ 1.06
DEPDC1Q5TB30 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.68■■□□□ 1.06
DEPDC1Q5TB30 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DEPDC1Q5TB30 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.68■■□□□ 1.06
DEPDC1Q5TB30 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DEPDC1Q5TB30 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
DEPDC1Q5TB30 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.68■■□□□ 1.06
DEPDC1Q5TB30 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DEPDC1Q5TB30 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DEPDC1Q5TB30 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
DEPDC1Q5TB30 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
DEPDC1Q5TB30 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DEPDC1Q5TB30 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DEPDC1Q5TB30 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DEPDC1Q5TB30 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
DEPDC1Q5TB30 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DEPDC1Q5TB30 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DEPDC1Q5TB30 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DEPDC1Q5TB30 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DEPDC1Q5TB30 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DEPDC1Q5TB30 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DEPDC1Q5TB30 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DEPDC1Q5TB30 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DEPDC1Q5TB30 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.66■■□□□ 1.06
DEPDC1Q5TB30 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
DEPDC1Q5TB30 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DEPDC1Q5TB30 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.66■■□□□ 1.06
DEPDC1Q5TB30 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
DEPDC1Q5TB30 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.66■■□□□ 1.06
DEPDC1Q5TB30 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DEPDC1Q5TB30 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DEPDC1Q5TB30 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.65■■□□□ 1.06
DEPDC1Q5TB30 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
DEPDC1Q5TB30 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
DEPDC1Q5TB30 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
DEPDC1Q5TB30 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DEPDC1Q5TB30 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DEPDC1Q5TB30 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DEPDC1Q5TB30 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
DEPDC1Q5TB30 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
DEPDC1Q5TB30 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
DEPDC1Q5TB30 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.64■■□□□ 1.06
DEPDC1Q5TB30 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
DEPDC1Q5TB30 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.64■■□□□ 1.06
DEPDC1Q5TB30 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
DEPDC1Q5TB30 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
DEPDC1Q5TB30 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DEPDC1Q5TB30 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
DEPDC1Q5TB30 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
DEPDC1Q5TB30 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
DEPDC1Q5TB30 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.64■■□□□ 1.05
DEPDC1Q5TB30 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
DEPDC1Q5TB30 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
DEPDC1Q5TB30 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.64■■□□□ 1.05
DEPDC1Q5TB30 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DEPDC1Q5TB30 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.63■■□□□ 1.05
DEPDC1Q5TB30 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.63■■□□□ 1.05
DEPDC1Q5TB30 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
DEPDC1Q5TB30 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
DEPDC1Q5TB30 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
DEPDC1Q5TB30 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DEPDC1Q5TB30 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.62■■□□□ 1.05
DEPDC1Q5TB30 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DEPDC1Q5TB30 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DEPDC1Q5TB30 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
DEPDC1Q5TB30 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.62■■□□□ 1.05
DEPDC1Q5TB30 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DEPDC1Q5TB30 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.62■■□□□ 1.05
DEPDC1Q5TB30 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
DEPDC1Q5TB30 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.62■■□□□ 1.05
DEPDC1Q5TB30 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.62■■□□□ 1.05
DEPDC1Q5TB30 ANOS2P-203ENST00000472227 1816 ntBASIC21.62■■□□□ 1.05
DEPDC1Q5TB30 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
DEPDC1Q5TB30 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
DEPDC1Q5TB30 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
DEPDC1Q5TB30 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
DEPDC1Q5TB30 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.61■■□□□ 1.05
DEPDC1Q5TB30 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DEPDC1Q5TB30 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DEPDC1Q5TB30 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
DEPDC1Q5TB30 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.61■■□□□ 1.05
DEPDC1Q5TB30 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.61■■□□□ 1.05
DEPDC1Q5TB30 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.61■■□□□ 1.05
DEPDC1Q5TB30 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.61■■□□□ 1.05
DEPDC1Q5TB30 AL035685.1-201ENST00000636663 812 ntBASIC21.61■■□□□ 1.05
DEPDC1Q5TB30 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
DEPDC1Q5TB30 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
DEPDC1Q5TB30 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
DEPDC1Q5TB30 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DEPDC1Q5TB30 AC005703.6-201ENST00000623265 1329 ntBASIC21.6■■□□□ 1.05
DEPDC1Q5TB30 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DEPDC1Q5TB30 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
DEPDC1Q5TB30 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DEPDC1Q5TB30 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DEPDC1Q5TB30 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
DEPDC1Q5TB30 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
DEPDC1Q5TB30 DUSP8P5-201ENST00000422884 1815 ntBASIC21.59■■□□□ 1.05
DEPDC1Q5TB30 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.59■■□□□ 1.05
DEPDC1Q5TB30 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms