Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 BX255925.1-201ENST00000566954 1854 ntBASIC26.04■■□□□ 1.76
COL13A1Q5TAT6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
COL13A1Q5TAT6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC26.04■■□□□ 1.76
COL13A1Q5TAT6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.76
COL13A1Q5TAT6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
COL13A1Q5TAT6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC26.03■■□□□ 1.76
COL13A1Q5TAT6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC26.03■■□□□ 1.76
COL13A1Q5TAT6 MFSD11-216ENST00000590393 1141 ntBASIC26.03■■□□□ 1.76
COL13A1Q5TAT6 REXO1L12P-201ENST00000622156 912 ntBASIC26.03■■□□□ 1.76
COL13A1Q5TAT6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.03■■□□□ 1.76
COL13A1Q5TAT6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
COL13A1Q5TAT6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
COL13A1Q5TAT6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.02■■□□□ 1.76
COL13A1Q5TAT6 DUX4L16-201ENST00000555130 1264 ntBASIC26.02■■□□□ 1.76
COL13A1Q5TAT6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC26.02■■□□□ 1.76
COL13A1Q5TAT6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
COL13A1Q5TAT6 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL13A1Q5TAT6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
COL13A1Q5TAT6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
COL13A1Q5TAT6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC26.02■■□□□ 1.76
COL13A1Q5TAT6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC26.02■■□□□ 1.76
COL13A1Q5TAT6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
COL13A1Q5TAT6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
COL13A1Q5TAT6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC26.01■■□□□ 1.75
COL13A1Q5TAT6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
COL13A1Q5TAT6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
COL13A1Q5TAT6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26■■□□□ 1.75
COL13A1Q5TAT6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26■■□□□ 1.75
COL13A1Q5TAT6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
COL13A1Q5TAT6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26■■□□□ 1.75
COL13A1Q5TAT6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC26■■□□□ 1.75
COL13A1Q5TAT6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
COL13A1Q5TAT6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
COL13A1Q5TAT6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
COL13A1Q5TAT6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC26■■□□□ 1.75
COL13A1Q5TAT6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
COL13A1Q5TAT6 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC26■■□□□ 1.75
COL13A1Q5TAT6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26■■□□□ 1.75
COL13A1Q5TAT6 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL13A1Q5TAT6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC25.99■■□□□ 1.75
COL13A1Q5TAT6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.99■■□□□ 1.75
COL13A1Q5TAT6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL13A1Q5TAT6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
COL13A1Q5TAT6 AC008550.1-201ENST00000511500 884 ntBASIC25.99■■□□□ 1.75
COL13A1Q5TAT6 USP36-216ENST00000589424 970 ntTSL 5 BASIC25.99■■□□□ 1.75
COL13A1Q5TAT6 LINC01023-201ENST00000606054 436 ntBASIC25.99■■□□□ 1.75
COL13A1Q5TAT6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
COL13A1Q5TAT6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
COL13A1Q5TAT6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL13A1Q5TAT6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL13A1Q5TAT6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC25.98■■□□□ 1.75
COL13A1Q5TAT6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL13A1Q5TAT6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL13A1Q5TAT6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL13A1Q5TAT6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL13A1Q5TAT6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
COL13A1Q5TAT6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC25.98■■□□□ 1.75
COL13A1Q5TAT6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
COL13A1Q5TAT6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.98■■□□□ 1.75
COL13A1Q5TAT6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC25.98■■□□□ 1.75
COL13A1Q5TAT6 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL13A1Q5TAT6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.97■■□□□ 1.75
COL13A1Q5TAT6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC25.97■■□□□ 1.75
COL13A1Q5TAT6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.97■■□□□ 1.75
COL13A1Q5TAT6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC25.97■■□□□ 1.75
COL13A1Q5TAT6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC25.97■■□□□ 1.75
COL13A1Q5TAT6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC25.97■■□□□ 1.75
COL13A1Q5TAT6 AC231657.2-201ENST00000624556 255 ntBASIC25.97■■□□□ 1.75
COL13A1Q5TAT6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC25.97■■□□□ 1.75
COL13A1Q5TAT6 AC105233.4-201ENST00000642045 216 ntBASIC25.97■■□□□ 1.75
COL13A1Q5TAT6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL13A1Q5TAT6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
COL13A1Q5TAT6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC25.96■■□□□ 1.75
COL13A1Q5TAT6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC25.96■■□□□ 1.75
COL13A1Q5TAT6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL13A1Q5TAT6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC25.96■■□□□ 1.75
COL13A1Q5TAT6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
COL13A1Q5TAT6 ADM-205ENST00000528544 586 ntTSL 2 BASIC25.96■■□□□ 1.75
COL13A1Q5TAT6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
COL13A1Q5TAT6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.96■■□□□ 1.75
COL13A1Q5TAT6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.96■■□□□ 1.75
COL13A1Q5TAT6 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
COL13A1Q5TAT6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
COL13A1Q5TAT6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL13A1Q5TAT6 AC007322.1-201ENST00000426983 750 ntBASIC25.95■■□□□ 1.74
COL13A1Q5TAT6 RARRES2P4-201ENST00000514074 484 ntBASIC25.95■■□□□ 1.74
COL13A1Q5TAT6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.95■■□□□ 1.74
COL13A1Q5TAT6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
COL13A1Q5TAT6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL13A1Q5TAT6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
COL13A1Q5TAT6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL13A1Q5TAT6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL13A1Q5TAT6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.94■■□□□ 1.74
COL13A1Q5TAT6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.94■■□□□ 1.74
COL13A1Q5TAT6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
COL13A1Q5TAT6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC25.93■■□□□ 1.74
COL13A1Q5TAT6 AL449106.1-201ENST00000608517 1980 ntBASIC25.93■■□□□ 1.74
COL13A1Q5TAT6 ESRRAP1-201ENST00000400596 1257 ntBASIC25.93■■□□□ 1.74
COL13A1Q5TAT6 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
COL13A1Q5TAT6 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms