Protein–RNA interactions for Protein: Q5T5X7

BEND3, BEN domain-containing protein 3, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEND3Q5T5X7 AC009086.3-201ENST00000623486 1008 ntBASIC28.38■■■□□ 2.13
BEND3Q5T5X7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
BEND3Q5T5X7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
BEND3Q5T5X7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
BEND3Q5T5X7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC28.38■■■□□ 2.13
BEND3Q5T5X7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
BEND3Q5T5X7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
BEND3Q5T5X7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
BEND3Q5T5X7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC28.37■■■□□ 2.13
BEND3Q5T5X7 AC005837.3-201ENST00000612163 286 ntBASIC28.37■■■□□ 2.13
BEND3Q5T5X7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
BEND3Q5T5X7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
BEND3Q5T5X7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
BEND3Q5T5X7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
BEND3Q5T5X7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
BEND3Q5T5X7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
BEND3Q5T5X7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
BEND3Q5T5X7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
BEND3Q5T5X7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
BEND3Q5T5X7 AC093323.1-202ENST00000635031 2045 ntBASIC28.35■■■□□ 2.13
BEND3Q5T5X7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
BEND3Q5T5X7 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
BEND3Q5T5X7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC28.35■■■□□ 2.13
BEND3Q5T5X7 MIR3181-201ENST00000578512 73 ntBASIC28.35■■■□□ 2.13
BEND3Q5T5X7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC28.35■■■□□ 2.13
BEND3Q5T5X7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
BEND3Q5T5X7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
BEND3Q5T5X7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
BEND3Q5T5X7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC28.35■■■□□ 2.13
BEND3Q5T5X7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
BEND3Q5T5X7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
BEND3Q5T5X7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC28.34■■■□□ 2.13
BEND3Q5T5X7 H19-210ENST00000439725 1929 ntTSL 2 BASIC28.34■■■□□ 2.13
BEND3Q5T5X7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
BEND3Q5T5X7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
BEND3Q5T5X7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
BEND3Q5T5X7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC28.34■■■□□ 2.13
BEND3Q5T5X7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC28.34■■■□□ 2.13
BEND3Q5T5X7 AL138724.1-201ENST00000606771 1088 ntBASIC28.34■■■□□ 2.13
BEND3Q5T5X7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC28.34■■■□□ 2.13
BEND3Q5T5X7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC28.34■■■□□ 2.13
BEND3Q5T5X7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
BEND3Q5T5X7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
BEND3Q5T5X7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
BEND3Q5T5X7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
BEND3Q5T5X7 AC144652.1-201ENST00000609974 1624 ntBASIC28.33■■■□□ 2.13
BEND3Q5T5X7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
BEND3Q5T5X7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC28.33■■■□□ 2.13
BEND3Q5T5X7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
BEND3Q5T5X7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC28.33■■■□□ 2.13
BEND3Q5T5X7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC28.33■■■□□ 2.13
BEND3Q5T5X7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
BEND3Q5T5X7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC28.33■■■□□ 2.13
BEND3Q5T5X7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
BEND3Q5T5X7 AC011298.3-201ENST00000615796 283 ntBASIC28.32■■■□□ 2.12
BEND3Q5T5X7 AC019069.1-201ENST00000610008 1333 ntBASIC28.32■■■□□ 2.12
BEND3Q5T5X7 FP325331.1-202ENST00000623531 1380 ntBASIC28.32■■■□□ 2.12
BEND3Q5T5X7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC28.32■■■□□ 2.12
BEND3Q5T5X7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
BEND3Q5T5X7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC28.31■■■□□ 2.12
BEND3Q5T5X7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
BEND3Q5T5X7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC28.31■■■□□ 2.12
BEND3Q5T5X7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC28.31■■■□□ 2.12
BEND3Q5T5X7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
BEND3Q5T5X7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC28.31■■■□□ 2.12
BEND3Q5T5X7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
BEND3Q5T5X7 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
BEND3Q5T5X7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
BEND3Q5T5X7 AC079630.1-202ENST00000618127 1840 ntBASIC28.3■■■□□ 2.12
BEND3Q5T5X7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
BEND3Q5T5X7 HES6-206ENST00000409574 738 ntTSL 2 BASIC28.3■■■□□ 2.12
BEND3Q5T5X7 SUDS3P1-201ENST00000505831 966 ntBASIC28.3■■■□□ 2.12
BEND3Q5T5X7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC28.3■■■□□ 2.12
BEND3Q5T5X7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.3■■■□□ 2.12
BEND3Q5T5X7 DUX4L4-201ENST00000566884 1269 ntBASIC28.3■■■□□ 2.12
BEND3Q5T5X7 MIR4767-201ENST00000582827 78 ntBASIC28.3■■■□□ 2.12
BEND3Q5T5X7 pRNA.6-201ENST00000610482 90 ntBASIC28.3■■■□□ 2.12
BEND3Q5T5X7 pRNA.5-201ENST00000612139 90 ntBASIC28.3■■■□□ 2.12
BEND3Q5T5X7 pRNA.11-201ENST00000618423 90 ntBASIC28.3■■■□□ 2.12
BEND3Q5T5X7 pRNA.13-201ENST00000619112 90 ntBASIC28.3■■■□□ 2.12
BEND3Q5T5X7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
BEND3Q5T5X7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
BEND3Q5T5X7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
BEND3Q5T5X7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC28.29■■■□□ 2.12
BEND3Q5T5X7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
BEND3Q5T5X7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC28.29■■■□□ 2.12
BEND3Q5T5X7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
BEND3Q5T5X7 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
BEND3Q5T5X7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
BEND3Q5T5X7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC28.28■■■□□ 2.12
BEND3Q5T5X7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC28.28■■■□□ 2.12
BEND3Q5T5X7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC28.28■■■□□ 2.12
BEND3Q5T5X7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
BEND3Q5T5X7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC28.28■■■□□ 2.12
BEND3Q5T5X7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.28■■■□□ 2.12
BEND3Q5T5X7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC28.28■■■□□ 2.12
BEND3Q5T5X7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
BEND3Q5T5X7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
BEND3Q5T5X7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
BEND3Q5T5X7 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms