Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRTCAP3Q53RY4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
KRTCAP3Q53RY4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KRTCAP3Q53RY4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRTCAP3Q53RY4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.21■□□□□ 0.83
KRTCAP3Q53RY4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRTCAP3Q53RY4 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.21■□□□□ 0.83
KRTCAP3Q53RY4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.21■□□□□ 0.83
KRTCAP3Q53RY4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.21■□□□□ 0.83
KRTCAP3Q53RY4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.21■□□□□ 0.83
KRTCAP3Q53RY4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
KRTCAP3Q53RY4 AC022211.4-201ENST00000625094 2161 ntBASIC20.21■□□□□ 0.83
KRTCAP3Q53RY4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
KRTCAP3Q53RY4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.21■□□□□ 0.83
KRTCAP3Q53RY4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
KRTCAP3Q53RY4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRTCAP3Q53RY4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRTCAP3Q53RY4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
KRTCAP3Q53RY4 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.2■□□□□ 0.82
KRTCAP3Q53RY4 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.2■□□□□ 0.82
KRTCAP3Q53RY4 YBX1P1-201ENST00000445822 960 ntBASIC20.2■□□□□ 0.82
KRTCAP3Q53RY4 IGHV3-19-201ENST00000521488 291 ntBASIC20.2■□□□□ 0.82
KRTCAP3Q53RY4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.2■□□□□ 0.82
KRTCAP3Q53RY4 AL499627.2-201ENST00000606283 725 ntBASIC20.2■□□□□ 0.82
KRTCAP3Q53RY4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRTCAP3Q53RY4 AC133637.1-201ENST00000624115 1537 ntBASIC20.2■□□□□ 0.82
KRTCAP3Q53RY4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRTCAP3Q53RY4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRTCAP3Q53RY4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRTCAP3Q53RY4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
KRTCAP3Q53RY4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.19■□□□□ 0.82
KRTCAP3Q53RY4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRTCAP3Q53RY4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRTCAP3Q53RY4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.19■□□□□ 0.82
KRTCAP3Q53RY4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
KRTCAP3Q53RY4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRTCAP3Q53RY4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRTCAP3Q53RY4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.19■□□□□ 0.82
KRTCAP3Q53RY4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRTCAP3Q53RY4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.19■□□□□ 0.82
KRTCAP3Q53RY4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.19■□□□□ 0.82
KRTCAP3Q53RY4 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.19■□□□□ 0.82
KRTCAP3Q53RY4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRTCAP3Q53RY4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRTCAP3Q53RY4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
KRTCAP3Q53RY4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
KRTCAP3Q53RY4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRTCAP3Q53RY4 MIR572-201ENST00000384983 95 ntBASIC20.18■□□□□ 0.82
KRTCAP3Q53RY4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.18■□□□□ 0.82
KRTCAP3Q53RY4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
KRTCAP3Q53RY4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.18■□□□□ 0.82
KRTCAP3Q53RY4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRTCAP3Q53RY4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRTCAP3Q53RY4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRTCAP3Q53RY4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRTCAP3Q53RY4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRTCAP3Q53RY4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.17■□□□□ 0.82
KRTCAP3Q53RY4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRTCAP3Q53RY4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRTCAP3Q53RY4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KRTCAP3Q53RY4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.17■□□□□ 0.82
KRTCAP3Q53RY4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRTCAP3Q53RY4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KRTCAP3Q53RY4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 AC123595.1-201ENST00000440769 1046 ntBASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 DUX4L4-201ENST00000566884 1269 ntBASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 AL354811.1-201ENST00000610286 706 ntBASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KRTCAP3Q53RY4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.15■□□□□ 0.82
KRTCAP3Q53RY4 AC027612.3-201ENST00000413684 1047 ntBASIC20.15■□□□□ 0.82
KRTCAP3Q53RY4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.15■□□□□ 0.82
KRTCAP3Q53RY4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.15■□□□□ 0.82
KRTCAP3Q53RY4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRTCAP3Q53RY4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRTCAP3Q53RY4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRTCAP3Q53RY4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
KRTCAP3Q53RY4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
KRTCAP3Q53RY4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRTCAP3Q53RY4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
KRTCAP3Q53RY4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
KRTCAP3Q53RY4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms