Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.41■■□□□ 1.02
TMEM35AQ53FP2 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TMEM35AQ53FP2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.4■■□□□ 1.02
TMEM35AQ53FP2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM35AQ53FP2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TMEM35AQ53FP2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM35AQ53FP2 DUSP8P3-201ENST00000399571 1760 ntBASIC21.4■■□□□ 1.02
TMEM35AQ53FP2 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM35AQ53FP2 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEM35AQ53FP2 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TMEM35AQ53FP2 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TMEM35AQ53FP2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TMEM35AQ53FP2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM35AQ53FP2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM35AQ53FP2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.39■■□□□ 1.01
TMEM35AQ53FP2 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM35AQ53FP2 AC009102.2-201ENST00000606772 1639 ntBASIC21.39■■□□□ 1.01
TMEM35AQ53FP2 AC144652.1-201ENST00000609974 1624 ntBASIC21.39■■□□□ 1.01
TMEM35AQ53FP2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.39■■□□□ 1.01
TMEM35AQ53FP2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEM35AQ53FP2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.39■■□□□ 1.01
TMEM35AQ53FP2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
TMEM35AQ53FP2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM35AQ53FP2 FP325331.1-202ENST00000623531 1380 ntBASIC21.38■■□□□ 1.01
TMEM35AQ53FP2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM35AQ53FP2 AL356441.2-201ENST00000443009 864 ntBASIC21.38■■□□□ 1.01
TMEM35AQ53FP2 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.38■■□□□ 1.01
TMEM35AQ53FP2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.38■■□□□ 1.01
TMEM35AQ53FP2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM35AQ53FP2 AL356740.2-201ENST00000601559 647 ntBASIC21.38■■□□□ 1.01
TMEM35AQ53FP2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM35AQ53FP2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM35AQ53FP2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.38■■□□□ 1.01
TMEM35AQ53FP2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM35AQ53FP2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM35AQ53FP2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEM35AQ53FP2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM35AQ53FP2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM35AQ53FP2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM35AQ53FP2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TMEM35AQ53FP2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.37■■□□□ 1.01
TMEM35AQ53FP2 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM35AQ53FP2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEM35AQ53FP2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.36■■□□□ 1.01
TMEM35AQ53FP2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM35AQ53FP2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.36■■□□□ 1.01
TMEM35AQ53FP2 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM35AQ53FP2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.36■■□□□ 1.01
TMEM35AQ53FP2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.36■■□□□ 1.01
TMEM35AQ53FP2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM35AQ53FP2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TMEM35AQ53FP2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TMEM35AQ53FP2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.36■■□□□ 1.01
TMEM35AQ53FP2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
TMEM35AQ53FP2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.35■■□□□ 1.01
TMEM35AQ53FP2 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.35■■□□□ 1.01
TMEM35AQ53FP2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM35AQ53FP2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.35■■□□□ 1.01
TMEM35AQ53FP2 MIR3621-201ENST00000580529 85 ntBASIC21.35■■□□□ 1.01
TMEM35AQ53FP2 AL117332.1-201ENST00000622628 974 ntBASIC21.35■■□□□ 1.01
TMEM35AQ53FP2 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TMEM35AQ53FP2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
TMEM35AQ53FP2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM35AQ53FP2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM35AQ53FP2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.34■■□□□ 1.01
TMEM35AQ53FP2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM35AQ53FP2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.34■■□□□ 1.01
TMEM35AQ53FP2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEM35AQ53FP2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.34■■□□□ 1.01
TMEM35AQ53FP2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.34■■□□□ 1.01
TMEM35AQ53FP2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TMEM35AQ53FP2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
TMEM35AQ53FP2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM35AQ53FP2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM35AQ53FP2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM35AQ53FP2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM35AQ53FP2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM35AQ53FP2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM35AQ53FP2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM35AQ53FP2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM35AQ53FP2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMEM35AQ53FP2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.33■■□□□ 1
TMEM35AQ53FP2 C17orf82-201ENST00000623772 1530 ntBASIC21.33■■□□□ 1
TMEM35AQ53FP2 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.33■■□□□ 1
TMEM35AQ53FP2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1
TMEM35AQ53FP2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.33■■□□□ 1
TMEM35AQ53FP2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM35AQ53FP2 LINC01529-204ENST00000636474 1715 ntBASIC21.32■■□□□ 1
TMEM35AQ53FP2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM35AQ53FP2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.32■■□□□ 1
TMEM35AQ53FP2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.32■■□□□ 1
TMEM35AQ53FP2 AL353803.4-201ENST00000565882 1934 ntBASIC21.32■■□□□ 1
TMEM35AQ53FP2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.32■■□□□ 1
TMEM35AQ53FP2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM35AQ53FP2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM35AQ53FP2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM35AQ53FP2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.32■■□□□ 1
TMEM35AQ53FP2 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.32■■□□□ 1
TMEM35AQ53FP2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
TMEM35AQ53FP2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms