Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 tQ(UUG)D2tQ(UUG)D2 72 nt3.07□□□□□ -1.92
LSM6Q06406 tQ(UUG)D3tQ(UUG)D3 72 nt3.07□□□□□ -1.92
LSM6Q06406 tQ(UUG)E1tQ(UUG)E1 72 nt3.07□□□□□ -1.92
LSM6Q06406 tQ(UUG)HtQ(UUG)H 72 nt3.07□□□□□ -1.92
LSM6Q06406 tQ(UUG)LtQ(UUG)L 72 nt3.07□□□□□ -1.92
LSM6Q06406 NVJ1YHR195W 966 nt3.07□□□□□ -1.92
LSM6Q06406 ISY1YJR050W 708 nt3.07□□□□□ -1.92
LSM6Q06406 YLR125WYLR125W 411 nt3.07□□□□□ -1.92
LSM6Q06406 GDT1YBR187W 843 nt3.07□□□□□ -1.92
LSM6Q06406 NMD3YHR170W 1557 nt3.07□□□□□ -1.92
LSM6Q06406 RPN12YFR052W 825 nt3.06□□□□□ -1.92
LSM6Q06406 GPI10YGL142C 1851 nt3.06□□□□□ -1.92
LSM6Q06406 LAS1YKR063C 1509 nt3.06□□□□□ -1.92
LSM6Q06406 SUI1YNL244C 327 nt3.06□□□□□ -1.92
LSM6Q06406 FPK1YNR047W 2682 nt3.06□□□□□ -1.92
LSM6Q06406 YOR111WYOR111W 699 nt3.06□□□□□ -1.92
LSM6Q06406 MET12YPL023C 1974 nt3.06□□□□□ -1.92
LSM6Q06406 SPO19YPL130W 672 nt3.06□□□□□ -1.92
LSM6Q06406 YPR003CYPR003C 2265 nt3.06□□□□□ -1.92
LSM6Q06406 APC1YNL172W 5247 nt3.06□□□□□ -1.92
LSM6Q06406 PRT1YOR361C 2292 nt3.05□□□□□ -1.92
LSM6Q06406 SWH1YAR042W 3567 nt3.05□□□□□ -1.92
LSM6Q06406 RAD26YJR035W 3258 nt3.05□□□□□ -1.92
LSM6Q06406 STU1YBL034C 4542 nt3.05□□□□□ -1.92
LSM6Q06406 AVT7YIL088C 1473 nt3.05□□□□□ -1.92
LSM6Q06406 RPP1AYDL081C 321 nt3.05□□□□□ -1.92
LSM6Q06406 TRM8YDL201W 861 nt3.05□□□□□ -1.92
LSM6Q06406 YDR134CYDR134C 411 nt3.05□□□□□ -1.92
LSM6Q06406 PMP3YDR276C 168 nt3.05□□□□□ -1.92
LSM6Q06406 NTR2YKR022C 969 nt3.05□□□□□ -1.92
LSM6Q06406 MID2YLR332W 1131 nt3.05□□□□□ -1.92
LSM6Q06406 YPR071WYPR071W 636 nt3.05□□□□□ -1.92
LSM6Q06406 YAP1802YGR241C 1707 nt3.05□□□□□ -1.92
LSM6Q06406 BRE4YDL231C 3378 nt3.04□□□□□ -1.92
LSM6Q06406 ALG6YOR002W 1635 nt3.04□□□□□ -1.92
LSM6Q06406 OSH2YDL019C 3852 nt3.04□□□□□ -1.92
LSM6Q06406 MMT1YMR177W 1533 nt3.04□□□□□ -1.92
LSM6Q06406 SPT6YGR116W 4356 nt3.04□□□□□ -1.92
LSM6Q06406 TIM54YJL054W 1437 nt3.04□□□□□ -1.92
LSM6Q06406 PPZ1YML016C 2079 nt3.04□□□□□ -1.92
LSM6Q06406 CEG1YGL130W 1380 nt3.04□□□□□ -1.92
LSM6Q06406 MST1YKL194C 1389 nt3.04□□□□□ -1.92
LSM6Q06406 GET3YDL100C 1065 nt3.04□□□□□ -1.92
LSM6Q06406 YDR526CYDR526C 471 nt3.04□□□□□ -1.92
LSM6Q06406 VPS29YHR012W 849 nt3.04□□□□□ -1.92
LSM6Q06406 SOP4YJL192C 705 nt3.04□□□□□ -1.92
LSM6Q06406 PNG1YPL096W 1092 nt3.04□□□□□ -1.92
LSM6Q06406 YPR174CYPR174C 666 nt3.04□□□□□ -1.92
LSM6Q06406 MRPS9YBR146W 837 nt3.04□□□□□ -1.92
LSM6Q06406 EFM2YBR271W 1260 nt3.04□□□□□ -1.92
LSM6Q06406 MCM7YBR202W 2538 nt3.04□□□□□ -1.92
LSM6Q06406 RIM4YHL024W 2142 nt3.04□□□□□ -1.92
LSM6Q06406 PRM7YDL039C 2097 nt3.04□□□□□ -1.92
LSM6Q06406 HCA4YJL033W 2313 nt3.03□□□□□ -1.92
LSM6Q06406 YHR177WYHR177W 1362 nt3.03□□□□□ -1.92
LSM6Q06406 NBP2YDR162C 711 nt3.03□□□□□ -1.92
LSM6Q06406 NIS1YNL078W 1224 nt3.03□□□□□ -1.92
LSM6Q06406 TOM5YPR133W-A 153 nt3.03□□□□□ -1.92
LSM6Q06406 MCM2YBL023C 2607 nt3.02□□□□□ -1.93
LSM6Q06406 NCR1YPL006W 3513 nt3.02□□□□□ -1.93
LSM6Q06406 TYW3YGL050W 822 nt3.02□□□□□ -1.93
LSM6Q06406 tS(AGA)D3tS(AGA)D3 83 nt3.02□□□□□ -1.93
LSM6Q06406 YHR095WYHR095W 495 nt3.02□□□□□ -1.93
LSM6Q06406 YHR112CYHR112C 1137 nt3.02□□□□□ -1.93
LSM6Q06406 YMR114CYMR114C 1107 nt3.02□□□□□ -1.93
LSM6Q06406 SHP1YBL058W 1272 nt3.02□□□□□ -1.93
LSM6Q06406 YOR318CYOR318C 306 nt3.02□□□□□ -1.93
LSM6Q06406 NUP159YIL115C 4383 nt3.02□□□□□ -1.93
LSM6Q06406 GAD1YMR250W 1758 nt3.02□□□□□ -1.93
LSM6Q06406 SER33YIL074C 1410 nt3.02□□□□□ -1.93
LSM6Q06406 GIP4YAL031C 2283 nt3.02□□□□□ -1.93
LSM6Q06406 ARG4YHR018C 1392 nt3.01□□□□□ -1.93
LSM6Q06406 PRP11YDL043C 801 nt3.01□□□□□ -1.93
LSM6Q06406 YER076CYER076C 909 nt3.01□□□□□ -1.93
LSM6Q06406 YNG2YHR090C 849 nt3.01□□□□□ -1.93
LSM6Q06406 COX2Q0250 756 nt3.01□□□□□ -1.93
LSM6Q06406 APS1YLR170C 471 nt3.01□□□□□ -1.93
LSM6Q06406 SEC72YLR292C 582 nt3.01□□□□□ -1.93
LSM6Q06406 AIF1YNR074C 1137 nt3.01□□□□□ -1.93
LSM6Q06406 KIP3YGL216W 2418 nt3.01□□□□□ -1.93
LSM6Q06406 YIL001WYIL001W 1542 nt3□□□□□ -1.93
LSM6Q06406 YBR139WYBR139W 1527 nt3□□□□□ -1.93
LSM6Q06406 PIC2YER053C 903 nt3□□□□□ -1.93
LSM6Q06406 YGL088WYGL088W 366 nt3□□□□□ -1.93
LSM6Q06406 AIR1YIL079C 1083 nt3□□□□□ -1.93
LSM6Q06406 ORM2YLR350W 651 nt3□□□□□ -1.93
LSM6Q06406 SAP30YMR263W 606 nt3□□□□□ -1.93
LSM6Q06406 SPS18YNL204C 903 nt3□□□□□ -1.93
LSM6Q06406 POP3YNL282W 588 nt3□□□□□ -1.93
LSM6Q06406 YPL041CYPL041C 624 nt3□□□□□ -1.93
LSM6Q06406 BCK2YER167W 2556 nt3□□□□□ -1.93
LSM6Q06406 ZDS1YMR273C 2748 nt2.99□□□□□ -1.93
LSM6Q06406 TDA11YHR159W 1515 nt2.99□□□□□ -1.93
LSM6Q06406 XRS2YDR369C 2565 nt2.99□□□□□ -1.93
LSM6Q06406 CHL1YPL008W 2586 nt2.99□□□□□ -1.93
LSM6Q06406 YGL108CYGL108C 423 nt2.99□□□□□ -1.93
LSM6Q06406 EFM4YIL064W 774 nt2.99□□□□□ -1.93
LSM6Q06406 ATP14YLR295C 375 nt2.99□□□□□ -1.93
LSM6Q06406 ELA1YNL230C 1140 nt2.99□□□□□ -1.93
LSM6Q06406 TAF12YDR145W 1620 nt2.99□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms