Protein–RNA interactions for Protein: Q02767

VPS28, Vacuolar protein sorting-associated protein 28, yeastyeast

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS28Q02767 SRV2YNL138W 1581 nt3.71□□□□□ -1.82
VPS28Q02767 ECM22YLR228C 2445 nt3.71□□□□□ -1.82
VPS28Q02767 MET3YJR010W 1536 nt3.7□□□□□ -1.82
VPS28Q02767 YBR139WYBR139W 1527 nt3.7□□□□□ -1.82
VPS28Q02767 TRF5YNL299W 1929 nt3.7□□□□□ -1.82
VPS28Q02767 ECM32YER176W 3366 nt3.7□□□□□ -1.82
VPS28Q02767 UPS3YDR185C 540 nt3.7□□□□□ -1.82
VPS28Q02767 NUP42YDR192C 1293 nt3.7□□□□□ -1.82
VPS28Q02767 ATP5YDR298C 639 nt3.7□□□□□ -1.82
VPS28Q02767 LOH1YJL038C 660 nt3.7□□□□□ -1.82
VPS28Q02767 MRPL39YML009C 213 nt3.7□□□□□ -1.82
VPS28Q02767 HAL1YPR005C 885 nt3.7□□□□□ -1.82
VPS28Q02767 PBN1YCL052C 1251 nt3.7□□□□□ -1.82
VPS28Q02767 YND1YER005W 1893 nt3.7□□□□□ -1.82
VPS28Q02767 EMP47YFL048C 1338 nt3.7□□□□□ -1.82
VPS28Q02767 WTM1YOR230W 1314 nt3.7□□□□□ -1.82
VPS28Q02767 VPS73YGL104C 1461 nt3.69□□□□□ -1.82
VPS28Q02767 MHO1YJR008W 1017 nt3.69□□□□□ -1.82
VPS28Q02767 NCE102YPR149W 522 nt3.69□□□□□ -1.82
VPS28Q02767 MCP2YLR253W 1710 nt3.69□□□□□ -1.82
VPS28Q02767 BRE4YDL231C 3378 nt3.69□□□□□ -1.82
VPS28Q02767 TDA11YHR159W 1515 nt3.69□□□□□ -1.82
VPS28Q02767 DPB2YPR175W 2070 nt3.69□□□□□ -1.82
VPS28Q02767 TAF7YMR227C 1773 nt3.68□□□□□ -1.82
VPS28Q02767 MAG2YLR427W 2013 nt3.68□□□□□ -1.82
VPS28Q02767 NOP8YOL144W 1455 nt3.68□□□□□ -1.82
VPS28Q02767 LPL1YOR059C 1353 nt3.68□□□□□ -1.82
VPS28Q02767 STE12YHR084W 2067 nt3.68□□□□□ -1.82
VPS28Q02767 YDL027CYDL027C 1263 nt3.68□□□□□ -1.82
VPS28Q02767 THI13YDL244W 1023 nt3.68□□□□□ -1.82
VPS28Q02767 SOL4YGR248W 768 nt3.68□□□□□ -1.82
VPS28Q02767 THI11YJR156C 1023 nt3.68□□□□□ -1.82
VPS28Q02767 OCA1YNL099C 717 nt3.68□□□□□ -1.82
VPS28Q02767 DCS2YOR173W 1062 nt3.68□□□□□ -1.82
VPS28Q02767 CDC14YFR028C 1656 nt3.68□□□□□ -1.82
VPS28Q02767 NHX1YDR456W 1902 nt3.68□□□□□ -1.82
VPS28Q02767 DIP2YLR129W 2832 nt3.67□□□□□ -1.82
VPS28Q02767 SRB5YGR104C 924 nt3.67□□□□□ -1.82
VPS28Q02767 VPS29YHR012W 849 nt3.67□□□□□ -1.82
VPS28Q02767 YIL165CYIL165C 360 nt3.67□□□□□ -1.82
VPS28Q02767 NTR2YKR022C 969 nt3.67□□□□□ -1.82
VPS28Q02767 ERG3YLR056W 1098 nt3.67□□□□□ -1.82
VPS28Q02767 ORM2YLR350W 651 nt3.67□□□□□ -1.82
VPS28Q02767 YMR082CYMR082C 357 nt3.67□□□□□ -1.82
VPS28Q02767 LCB2YDR062W 1686 nt3.67□□□□□ -1.82
VPS28Q02767 UBP7YIL156W 3216 nt3.67□□□□□ -1.82
VPS28Q02767 YDR274CYDR274C 372 nt3.66□□□□□ -1.82
VPS28Q02767 WSS1YHR134W 810 nt3.66□□□□□ -1.82
VPS28Q02767 YLR374CYLR374C 390 nt3.66□□□□□ -1.82
VPS28Q02767 YIF1YNL263C 945 nt3.66□□□□□ -1.82
VPS28Q02767 YDC1YPL087W 954 nt3.66□□□□□ -1.82
VPS28Q02767 DBP3YGL078C 1572 nt3.66□□□□□ -1.82
VPS28Q02767 NUP133YKR082W 3474 nt3.65□□□□□ -1.82
VPS28Q02767 OCA4YCR095C 1089 nt3.65□□□□□ -1.83
VPS28Q02767 YER145C-AYER145C-A 438 nt3.65□□□□□ -1.83
VPS28Q02767 PRE9YGR135W 777 nt3.65□□□□□ -1.83
VPS28Q02767 YIL171WYIL171W 330 nt3.65□□□□□ -1.83
VPS28Q02767 RAD27YKL113C 1149 nt3.65□□□□□ -1.83
VPS28Q02767 YLR283WYLR283W 945 nt3.65□□□□□ -1.83
VPS28Q02767 GAL11YOL051W 3246 nt3.65□□□□□ -1.83
VPS28Q02767 NOC2YOR206W 2133 nt3.65□□□□□ -1.83
VPS28Q02767 ATG2YNL242W 4779 nt3.65□□□□□ -1.83
VPS28Q02767 BUD8YLR353W 1812 nt3.65□□□□□ -1.83
VPS28Q02767 TRK1YJL129C 3708 nt3.65□□□□□ -1.83
VPS28Q02767 YIL001WYIL001W 1542 nt3.65□□□□□ -1.83
VPS28Q02767 ADP1YCR011C 3150 nt3.64□□□□□ -1.83
VPS28Q02767 HMLALPHA1YCL066W 528 nt3.64□□□□□ -1.83
VPS28Q02767 MATALPHA1YCR040W 528 nt3.64□□□□□ -1.83
VPS28Q02767 YHR145CYHR145C 357 nt3.64□□□□□ -1.83
VPS28Q02767 YHR214WYHR214W 612 nt3.64□□□□□ -1.83
VPS28Q02767 YIL028WYIL028W 399 nt3.64□□□□□ -1.83
VPS28Q02767 RFU1YLR073C 603 nt3.64□□□□□ -1.83
VPS28Q02767 YAR066WYAR066W 612 nt3.64□□□□□ -1.83
VPS28Q02767 ARG8YOL140W 1272 nt3.64□□□□□ -1.83
VPS28Q02767 FEX1YOR390W 1128 nt3.64□□□□□ -1.83
VPS28Q02767 FEX2YPL279C 1128 nt3.64□□□□□ -1.83
VPS28Q02767 YBR141W-AYBR141W-A 96 nt3.64□□□□□ -1.83
VPS28Q02767 SRB6YBR253W 366 nt3.64□□□□□ -1.83
VPS28Q02767 SRO7YPR032W 3102 nt3.64□□□□□ -1.83
VPS28Q02767 TCO89YPL180W 2400 nt3.64□□□□□ -1.83
VPS28Q02767 HIS4YCL030C 2400 nt3.64□□□□□ -1.83
VPS28Q02767 NOP58YOR310C 1536 nt3.64□□□□□ -1.83
VPS28Q02767 THI7YLR237W 1797 nt3.63□□□□□ -1.83
VPS28Q02767 SKM1YOL113W 1968 nt3.63□□□□□ -1.83
VPS28Q02767 PIM1YBL022C 3402 nt3.63□□□□□ -1.83
VPS28Q02767 TAF12YDR145W 1620 nt3.63□□□□□ -1.83
VPS28Q02767 GRS2YPR081C 1857 nt3.63□□□□□ -1.83
VPS28Q02767 tQ(UUG)CtQ(UUG)C 72 nt3.63□□□□□ -1.83
VPS28Q02767 tQ(UUG)D1tQ(UUG)D1 72 nt3.63□□□□□ -1.83
VPS28Q02767 tQ(UUG)D2tQ(UUG)D2 72 nt3.63□□□□□ -1.83
VPS28Q02767 tQ(UUG)D3tQ(UUG)D3 72 nt3.63□□□□□ -1.83
VPS28Q02767 tQ(UUG)E1tQ(UUG)E1 72 nt3.63□□□□□ -1.83
VPS28Q02767 tQ(UUG)HtQ(UUG)H 72 nt3.63□□□□□ -1.83
VPS28Q02767 tQ(UUG)LtQ(UUG)L 72 nt3.63□□□□□ -1.83
VPS28Q02767 YIL014C-AYIL014C-A 315 nt3.63□□□□□ -1.83
VPS28Q02767 IRC9YJL142C 393 nt3.63□□□□□ -1.83
VPS28Q02767 ADD66YKL206C 804 nt3.63□□□□□ -1.83
VPS28Q02767 KTR2YKR061W 1278 nt3.63□□□□□ -1.83
VPS28Q02767 YKR104WYKR104W 921 nt3.63□□□□□ -1.83
VPS28Q02767 ROT1YMR200W 771 nt3.63□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 18.6 ms