Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 AC144652.1-201ENST00000609974 1624 ntBASIC21.27■■□□□ 1
TRA2BP62995 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRA2BP62995 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.27■■□□□ 1
TRA2BP62995 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRA2BP62995 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.27■■□□□ 1
TRA2BP62995 TSPY9P-201ENST00000440215 945 ntBASIC21.27■■□□□ 1
TRA2BP62995 TSPY11P-201ENST00000442607 1045 ntBASIC21.27■■□□□ 1
TRA2BP62995 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.27■■□□□ 1
TRA2BP62995 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.27■■□□□ 1
TRA2BP62995 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRA2BP62995 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRA2BP62995 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.27■□□□□ 0.99
TRA2BP62995 AC068473.5-201ENST00000616428 2072 ntBASIC21.27■□□□□ 0.99
TRA2BP62995 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRA2BP62995 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TRA2BP62995 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TRA2BP62995 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRA2BP62995 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRA2BP62995 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRA2BP62995 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRA2BP62995 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
TRA2BP62995 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
TRA2BP62995 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRA2BP62995 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TRA2BP62995 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
TRA2BP62995 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRA2BP62995 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRA2BP62995 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRA2BP62995 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRA2BP62995 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRA2BP62995 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRA2BP62995 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TRA2BP62995 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRA2BP62995 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRA2BP62995 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.25■□□□□ 0.99
TRA2BP62995 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TRA2BP62995 FP325331.1-202ENST00000623531 1380 ntBASIC21.24■□□□□ 0.99
TRA2BP62995 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRA2BP62995 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRA2BP62995 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.24■□□□□ 0.99
TRA2BP62995 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRA2BP62995 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.24■□□□□ 0.99
TRA2BP62995 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TRA2BP62995 UNC93B8-201ENST00000511903 705 ntBASIC21.24■□□□□ 0.99
TRA2BP62995 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.24■□□□□ 0.99
TRA2BP62995 MIR6724-1-201ENST00000616420 92 ntBASIC21.24■□□□□ 0.99
TRA2BP62995 MIR6724-2-201ENST00000616483 92 ntBASIC21.24■□□□□ 0.99
TRA2BP62995 MIR6724-4-201ENST00000617390 92 ntBASIC21.24■□□□□ 0.99
TRA2BP62995 MIR6724-3-201ENST00000622482 92 ntBASIC21.24■□□□□ 0.99
TRA2BP62995 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRA2BP62995 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.24■□□□□ 0.99
TRA2BP62995 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.24■□□□□ 0.99
TRA2BP62995 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRA2BP62995 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.24■□□□□ 0.99
TRA2BP62995 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRA2BP62995 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRA2BP62995 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRA2BP62995 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.23■□□□□ 0.99
TRA2BP62995 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.23■□□□□ 0.99
TRA2BP62995 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.23■□□□□ 0.99
TRA2BP62995 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRA2BP62995 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRA2BP62995 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.23■□□□□ 0.99
TRA2BP62995 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRA2BP62995 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRA2BP62995 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRA2BP62995 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRA2BP62995 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
TRA2BP62995 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRA2BP62995 AL353803.4-201ENST00000565882 1934 ntBASIC21.21■□□□□ 0.99
TRA2BP62995 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.21■□□□□ 0.99
TRA2BP62995 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.21■□□□□ 0.99
TRA2BP62995 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRA2BP62995 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRA2BP62995 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TRA2BP62995 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRA2BP62995 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRA2BP62995 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
TRA2BP62995 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TRA2BP62995 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRA2BP62995 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.2■□□□□ 0.98
TRA2BP62995 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRA2BP62995 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.2■□□□□ 0.98
TRA2BP62995 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRA2BP62995 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRA2BP62995 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRA2BP62995 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.19■□□□□ 0.98
TRA2BP62995 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRA2BP62995 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.19■□□□□ 0.98
TRA2BP62995 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRA2BP62995 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TRA2BP62995 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.19■□□□□ 0.98
TRA2BP62995 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.19■□□□□ 0.98
TRA2BP62995 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRA2BP62995 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.19■□□□□ 0.98
TRA2BP62995 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
TRA2BP62995 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRA2BP62995 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.19■□□□□ 0.98
TRA2BP62995 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRA2BP62995 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms