Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RPS4XP62701 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.34■□□□□ 0.85
RPS4XP62701 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.34■□□□□ 0.85
RPS4XP62701 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.34■□□□□ 0.85
RPS4XP62701 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.34■□□□□ 0.85
RPS4XP62701 SNX5-217ENST00000606557 1087 ntBASIC20.34■□□□□ 0.85
RPS4XP62701 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.34■□□□□ 0.85
RPS4XP62701 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RPS4XP62701 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.34■□□□□ 0.85
RPS4XP62701 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RPS4XP62701 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RPS4XP62701 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RPS4XP62701 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.33■□□□□ 0.85
RPS4XP62701 TSPY9P-201ENST00000440215 945 ntBASIC20.33■□□□□ 0.85
RPS4XP62701 TSPY11P-201ENST00000442607 1045 ntBASIC20.33■□□□□ 0.85
RPS4XP62701 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.33■□□□□ 0.85
RPS4XP62701 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.33■□□□□ 0.85
RPS4XP62701 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.33■□□□□ 0.85
RPS4XP62701 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPS4XP62701 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RPS4XP62701 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPS4XP62701 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.33■□□□□ 0.84
RPS4XP62701 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.33■□□□□ 0.84
RPS4XP62701 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPS4XP62701 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RPS4XP62701 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.33■□□□□ 0.84
RPS4XP62701 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS4XP62701 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS4XP62701 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS4XP62701 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.32■□□□□ 0.84
RPS4XP62701 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS4XP62701 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
RPS4XP62701 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS4XP62701 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
RPS4XP62701 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS4XP62701 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.32■□□□□ 0.84
RPS4XP62701 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RPS4XP62701 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RPS4XP62701 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RPS4XP62701 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS4XP62701 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS4XP62701 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS4XP62701 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS4XP62701 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.31■□□□□ 0.84
RPS4XP62701 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RPS4XP62701 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RPS4XP62701 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.31■□□□□ 0.84
RPS4XP62701 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.31■□□□□ 0.84
RPS4XP62701 AC021242.3-201ENST00000607598 1377 ntBASIC20.31■□□□□ 0.84
RPS4XP62701 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.31■□□□□ 0.84
RPS4XP62701 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPS4XP62701 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
RPS4XP62701 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPS4XP62701 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.3■□□□□ 0.84
RPS4XP62701 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPS4XP62701 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.3■□□□□ 0.84
RPS4XP62701 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.3■□□□□ 0.84
RPS4XP62701 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.3■□□□□ 0.84
RPS4XP62701 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.3■□□□□ 0.84
RPS4XP62701 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.3■□□□□ 0.84
RPS4XP62701 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
RPS4XP62701 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPS4XP62701 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPS4XP62701 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
RPS4XP62701 AC079630.1-202ENST00000618127 1840 ntBASIC20.3■□□□□ 0.84
RPS4XP62701 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS4XP62701 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.29■□□□□ 0.84
RPS4XP62701 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS4XP62701 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.29■□□□□ 0.84
RPS4XP62701 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPS4XP62701 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPS4XP62701 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.29■□□□□ 0.84
RPS4XP62701 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.29■□□□□ 0.84
RPS4XP62701 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS4XP62701 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPS4XP62701 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPS4XP62701 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RPS4XP62701 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS4XP62701 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.28■□□□□ 0.84
RPS4XP62701 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS4XP62701 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS4XP62701 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS4XP62701 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.28■□□□□ 0.84
RPS4XP62701 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.28■□□□□ 0.84
RPS4XP62701 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.28■□□□□ 0.84
RPS4XP62701 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.28■□□□□ 0.84
RPS4XP62701 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.28■□□□□ 0.84
RPS4XP62701 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPS4XP62701 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RPS4XP62701 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.27■□□□□ 0.84
RPS4XP62701 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RPS4XP62701 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RPS4XP62701 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.27■□□□□ 0.84
RPS4XP62701 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4XP62701 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RPS4XP62701 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.27■□□□□ 0.84
RPS4XP62701 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.27■□□□□ 0.84
RPS4XP62701 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.27■□□□□ 0.83
RPS4XP62701 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.27■□□□□ 0.83
RPS4XP62701 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms