Protein–RNA interactions for Protein: P53259

PCP1, Rhomboid protein 1, mitochondrial, yeast

Predictions only

Length 346 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
PCP1	P53259	MCH4	YOL119C	1506 nt		4.24	□□□□□ -1.73
PCP1	P53259	HRR25	YPL204W	1485 nt		4.24	□□□□□ -1.73
PCP1	P53259	SUM1	YDR310C	3189 nt		4.23	□□□□□ -1.73
PCP1	P53259	NGL2	YMR285C	1548 nt		4.23	□□□□□ -1.73
PCP1	P53259	RPB7	YDR404C	516 nt		4.23	□□□□□ -1.73
PCP1	P53259	NOP16	YER002W	696 nt		4.23	□□□□□ -1.73
PCP1	P53259	YGL199C	YGL199C	471 nt		4.23	□□□□□ -1.73
PCP1	P53259	YGR079W	YGR079W	1113 nt		4.23	□□□□□ -1.73
PCP1	P53259	YGR204C-A	YGR204C-A	114 nt		4.23	□□□□□ -1.73
PCP1	P53259	CIR1	YGR207C	786 nt		4.23	□□□□□ -1.73
PCP1	P53259	DBP8	YHR169W	1296 nt		4.23	□□□□□ -1.73
PCP1	P53259	YIL089W	YIL089W	618 nt		4.23	□□□□□ -1.73
PCP1	P53259	HPM1	YIL110W	1134 nt		4.23	□□□□□ -1.73
PCP1	P53259	MIM2	YLR099W-A	264 nt		4.23	□□□□□ -1.73
PCP1	P53259	YDC1	YPL087W	954 nt		4.23	□□□□□ -1.73
PCP1	P53259	QCR2	YPR191W	1107 nt		4.23	□□□□□ -1.73
PCP1	P53259	YSA1	YBR111C	696 nt		4.23	□□□□□ -1.73
PCP1	P53259	ESF1	YDR365C	1887 nt		4.23	□□□□□ -1.73
PCP1	P53259	KRS1	YDR037W	1776 nt		4.22	□□□□□ -1.73
PCP1	P53259	SNF3	YDL194W	2655 nt		4.22	□□□□□ -1.73
PCP1	P53259	GCN20	YFR009W	2259 nt		4.22	□□□□□ -1.73
PCP1	P53259	YMR105W-A	YMR105W-A	195 nt		4.22	□□□□□ -1.73
PCP1	P53259	YNL174W	YNL174W	573 nt		4.22	□□□□□ -1.73
PCP1	P53259	NRM1	YNR009W	750 nt		4.22	□□□□□ -1.73
PCP1	P53259	DOA1	YKL213C	2148 nt		4.22	□□□□□ -1.73
PCP1	P53259	DNF2	YDR093W	4839 nt		4.21	□□□□□ -1.73
PCP1	P53259	YAP1802	YGR241C	1707 nt		4.21	□□□□□ -1.73
PCP1	P53259	SPR28	YDR218C	1272 nt		4.21	□□□□□ -1.74
PCP1	P53259	HRT3	YLR097C	1035 nt		4.21	□□□□□ -1.74
PCP1	P53259	NHP6A	YPR052C	282 nt		4.21	□□□□□ -1.74
PCP1	P53259	APM2	YHL019C	1818 nt		4.21	□□□□□ -1.74
PCP1	P53259	MDL1	YLR188W	2088 nt		4.2	□□□□□ -1.74
PCP1	P53259	FBP26	YJL155C	1359 nt		4.2	□□□□□ -1.74
PCP1	P53259	LAP3	YNL239W	1365 nt		4.2	□□□□□ -1.74
PCP1	P53259	snR63	snR63	255 nt		4.2	□□□□□ -1.74
PCP1	P53259	AIR2	YDL175C	1035 nt		4.2	□□□□□ -1.74
PCP1	P53259	CNL1	YDR357C	369 nt		4.2	□□□□□ -1.74
PCP1	P53259	RPL28	YGL103W	450 nt		4.2	□□□□□ -1.74
PCP1	P53259	DCD1	YHR144C	939 nt		4.2	□□□□□ -1.74
PCP1	P53259	YLR049C	YLR049C	1287 nt		4.2	□□□□□ -1.74
PCP1	P53259	SPS4	YOR313C	1017 nt		4.2	□□□□□ -1.74
PCP1	P53259	MGR2	YPL098C	342 nt		4.2	□□□□□ -1.74
PCP1	P53259	IME4	YGL192W	1803 nt		4.2	□□□□□ -1.74
PCP1	P53259	RFT1	YBL020W	1725 nt		4.2	□□□□□ -1.74
PCP1	P53259	MAL11	YGR289C	1851 nt		4.2	□□□□□ -1.74
PCP1	P53259	RGT1	YKL038W	3513 nt		4.19	□□□□□ -1.74
PCP1	P53259	BUD8	YLR353W	1812 nt		4.19	□□□□□ -1.74
PCP1	P53259	YMR102C	YMR102C	2505 nt		4.19	□□□□□ -1.74
PCP1	P53259	PTC1	YDL006W	846 nt		4.19	□□□□□ -1.74
PCP1	P53259	SFK1	YKL051W	1062 nt		4.19	□□□□□ -1.74
PCP1	P53259	APS1	YLR170C	471 nt		4.19	□□□□□ -1.74
PCP1	P53259	SPO20	YMR017W	1194 nt		4.19	□□□□□ -1.74
PCP1	P53259	YPL199C	YPL199C	723 nt		4.19	□□□□□ -1.74
PCP1	P53259	BUD7	YOR299W	2241 nt		4.19	□□□□□ -1.74
PCP1	P53259	KTR7	YIL085C	1554 nt		4.19	□□□□□ -1.74
PCP1	P53259	ARN1	YHL040C	1884 nt		4.18	□□□□□ -1.74
PCP1	P53259	PHO90	YJL198W	2646 nt		4.18	□□□□□ -1.74
PCP1	P53259	PRD1	YCL057W	2139 nt		4.18	□□□□□ -1.74
PCP1	P53259	MBP1	YDL056W	2502 nt		4.18	□□□□□ -1.74
PCP1	P53259	YER133W-A	YER133W-A	342 nt		4.18	□□□□□ -1.74
PCP1	P53259	MRPL39	YML009C	213 nt		4.18	□□□□□ -1.74
PCP1	P53259	VPS71	YML041C	843 nt		4.18	□□□□□ -1.74
PCP1	P53259	IRC14	YOR135C	342 nt		4.18	□□□□□ -1.74
PCP1	P53259	YPL114W	YPL114W	420 nt		4.18	□□□□□ -1.74
PCP1	P53259	RAD53	YPL153C	2466 nt		4.18	□□□□□ -1.74
PCP1	P53259	IPI3	YNL182C	1668 nt		4.17	□□□□□ -1.74
PCP1	P53259	snR78	snR78	87 nt		4.17	□□□□□ -1.74
PCP1	P53259	NUP42	YDR192C	1293 nt		4.17	□□□□□ -1.74
PCP1	P53259	YDR222W	YDR222W	1248 nt		4.17	□□□□□ -1.74
PCP1	P53259	ADH4	YGL256W	1149 nt		4.17	□□□□□ -1.74
PCP1	P53259	MRP13	YGR084C	1020 nt		4.17	□□□□□ -1.74
PCP1	P53259	YIL163C	YIL163C	354 nt		4.17	□□□□□ -1.74
PCP1	P53259	TRS33	YOR115C	807 nt		4.17	□□□□□ -1.74
PCP1	P53259	CMR3	YPR013C	954 nt		4.17	□□□□□ -1.74
PCP1	P53259	YCL012C	YCL012C	405 nt		4.17	□□□□□ -1.74
PCP1	P53259	STR2	YJR130C	1920 nt		4.17	□□□□□ -1.74
PCP1	P53259	STE7	YDL159W	1548 nt		4.16	□□□□□ -1.74
PCP1	P53259	RRP3	YHR065C	1506 nt		4.16	□□□□□ -1.74
PCP1	P53259	IMD3	YLR432W	1572 nt		4.16	□□□□□ -1.74
PCP1	P53259	TRM13	YOL125W	1431 nt		4.16	□□□□□ -1.74
PCP1	P53259	GCV1	YDR019C	1203 nt		4.16	□□□□□ -1.74
PCP1	P53259	FRA2	YGL220W	363 nt		4.16	□□□□□ -1.74
PCP1	P53259	ELO3	YLR372W	1038 nt		4.16	□□□□□ -1.74
PCP1	P53259	YLR462W	YLR462W	609 nt		4.16	□□□□□ -1.74
PCP1	P53259	HEK2	YBL032W	1146 nt		4.16	□□□□□ -1.74
PCP1	P53259	YPR169W-A	YPR169W-A	219 nt		4.16	□□□□□ -1.74
PCP1	P53259	YPR170W-B	YPR170W-B	258 nt		4.16	□□□□□ -1.74
PCP1	P53259	LAS21	YJL062W	2493 nt		4.16	□□□□□ -1.74
PCP1	P53259	VHS2	YIL135C	1311 nt		4.16	□□□□□ -1.74
PCP1	P53259	STE20	YHL007C	2820 nt		4.16	□□□□□ -1.74
PCP1	P53259	HPC2	YBR215W	1878 nt		4.15	□□□□□ -1.74
PCP1	P53259	PRM1	YNL279W	1986 nt		4.15	□□□□□ -1.74
PCP1	P53259	YDL027C	YDL027C	1263 nt		4.15	□□□□□ -1.75
PCP1	P53259	MAF1	YDR005C	1188 nt		4.15	□□□□□ -1.75
PCP1	P53259	YEL067C	YEL067C	588 nt		4.15	□□□□□ -1.75
PCP1	P53259	POP6	YGR030C	477 nt		4.15	□□□□□ -1.75
PCP1	P53259	YGR219W	YGR219W	342 nt		4.15	□□□□□ -1.75
PCP1	P53259	PHO86	YJL117W	936 nt		4.15	□□□□□ -1.75
PCP1	P53259	TTI2	YJR136C	1266 nt		4.15	□□□□□ -1.75
PCP1	P53259	TFA2	YKR062W	987 nt		4.15	□□□□□ -1.75

Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms