Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSR4P51571 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.68■□□□□ 0.9
SSR4P51571 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.68■□□□□ 0.9
SSR4P51571 AC142381.2-201ENST00000566120 298 ntBASIC20.68■□□□□ 0.9
SSR4P51571 AL355001.2-201ENST00000620617 1191 ntBASIC20.68■□□□□ 0.9
SSR4P51571 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSR4P51571 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.68■□□□□ 0.9
SSR4P51571 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSR4P51571 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSR4P51571 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR4P51571 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSR4P51571 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR4P51571 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.67■□□□□ 0.9
SSR4P51571 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.67■□□□□ 0.9
SSR4P51571 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.67■□□□□ 0.9
SSR4P51571 MIR4767-201ENST00000582827 78 ntBASIC20.67■□□□□ 0.9
SSR4P51571 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR4P51571 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.66■□□□□ 0.9
SSR4P51571 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SSR4P51571 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.66■□□□□ 0.9
SSR4P51571 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
SSR4P51571 MIR3181-201ENST00000578512 73 ntBASIC20.66■□□□□ 0.9
SSR4P51571 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.66■□□□□ 0.9
SSR4P51571 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.66■□□□□ 0.9
SSR4P51571 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSR4P51571 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.66■□□□□ 0.9
SSR4P51571 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.66■□□□□ 0.9
SSR4P51571 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSR4P51571 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SSR4P51571 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSR4P51571 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSR4P51571 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SSR4P51571 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SSR4P51571 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSR4P51571 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSR4P51571 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSR4P51571 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.65■□□□□ 0.9
SSR4P51571 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.65■□□□□ 0.9
SSR4P51571 pRNA.6-201ENST00000610482 90 ntBASIC20.65■□□□□ 0.9
SSR4P51571 pRNA.5-201ENST00000612139 90 ntBASIC20.65■□□□□ 0.9
SSR4P51571 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.65■□□□□ 0.9
SSR4P51571 pRNA.11-201ENST00000618423 90 ntBASIC20.65■□□□□ 0.9
SSR4P51571 pRNA.13-201ENST00000619112 90 ntBASIC20.65■□□□□ 0.9
SSR4P51571 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
SSR4P51571 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SSR4P51571 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSR4P51571 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
SSR4P51571 FP325331.1-202ENST00000623531 1380 ntBASIC20.64■□□□□ 0.89
SSR4P51571 ABCB10P4-201ENST00000566803 2184 ntBASIC20.64■□□□□ 0.89
SSR4P51571 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.64■□□□□ 0.89
SSR4P51571 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SSR4P51571 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SSR4P51571 AL031432.3-201ENST00000607698 485 ntBASIC20.64■□□□□ 0.89
SSR4P51571 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.64■□□□□ 0.89
SSR4P51571 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SSR4P51571 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.64■□□□□ 0.89
SSR4P51571 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SSR4P51571 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSR4P51571 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.64■□□□□ 0.89
SSR4P51571 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSR4P51571 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.63■□□□□ 0.89
SSR4P51571 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR4P51571 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR4P51571 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSR4P51571 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SSR4P51571 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR4P51571 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR4P51571 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.63■□□□□ 0.89
SSR4P51571 AC136469.2-201ENST00000623944 1028 ntBASIC20.63■□□□□ 0.89
SSR4P51571 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSR4P51571 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR4P51571 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSR4P51571 AC144652.1-201ENST00000609974 1624 ntBASIC20.63■□□□□ 0.89
SSR4P51571 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.63■□□□□ 0.89
SSR4P51571 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR4P51571 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR4P51571 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSR4P51571 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR4P51571 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.62■□□□□ 0.89
SSR4P51571 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSR4P51571 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSR4P51571 SUDS3P1-201ENST00000505831 966 ntBASIC20.62■□□□□ 0.89
SSR4P51571 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SSR4P51571 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR4P51571 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSR4P51571 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR4P51571 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSR4P51571 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR4P51571 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSR4P51571 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SSR4P51571 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SSR4P51571 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSR4P51571 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSR4P51571 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.61■□□□□ 0.89
SSR4P51571 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.61■□□□□ 0.89
SSR4P51571 AF213884.3-201ENST00000563833 479 ntBASIC20.61■□□□□ 0.89
SSR4P51571 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.61■□□□□ 0.89
SSR4P51571 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.61■□□□□ 0.89
SSR4P51571 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.61■□□□□ 0.89
SSR4P51571 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms