Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CXCL12P48061 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
CXCL12P48061 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.7■■□□□ 1.22
CXCL12P48061 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CXCL12P48061 AC133637.1-201ENST00000624115 1537 ntBASIC22.69■■□□□ 1.22
CXCL12P48061 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
CXCL12P48061 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.69■■□□□ 1.22
CXCL12P48061 HLA-L-209ENST00000420110 1011 ntBASIC22.69■■□□□ 1.22
CXCL12P48061 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.69■■□□□ 1.22
CXCL12P48061 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CXCL12P48061 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.68■■□□□ 1.22
CXCL12P48061 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CXCL12P48061 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC22.68■■□□□ 1.22
CXCL12P48061 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CXCL12P48061 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.68■■□□□ 1.22
CXCL12P48061 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CXCL12P48061 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CXCL12P48061 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.68■■□□□ 1.22
CXCL12P48061 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
CXCL12P48061 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CXCL12P48061 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CXCL12P48061 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CXCL12P48061 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CXCL12P48061 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CXCL12P48061 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.67■■□□□ 1.22
CXCL12P48061 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CXCL12P48061 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.67■■□□□ 1.22
CXCL12P48061 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CXCL12P48061 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CXCL12P48061 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CXCL12P48061 ALDH1A3-203ENST00000557963 1670 ntBASIC22.67■■□□□ 1.22
CXCL12P48061 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CXCL12P48061 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CXCL12P48061 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CXCL12P48061 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CXCL12P48061 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.66■■□□□ 1.22
CXCL12P48061 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CXCL12P48061 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CXCL12P48061 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.66■■□□□ 1.22
CXCL12P48061 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CXCL12P48061 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CXCL12P48061 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CXCL12P48061 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.66■■□□□ 1.22
CXCL12P48061 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CXCL12P48061 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CXCL12P48061 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CXCL12P48061 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.65■■□□□ 1.22
CXCL12P48061 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CXCL12P48061 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CXCL12P48061 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.65■■□□□ 1.22
CXCL12P48061 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CXCL12P48061 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.65■■□□□ 1.22
CXCL12P48061 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.65■■□□□ 1.22
CXCL12P48061 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.64■■□□□ 1.22
CXCL12P48061 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CXCL12P48061 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.64■■□□□ 1.21
CXCL12P48061 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.64■■□□□ 1.21
CXCL12P48061 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.64■■□□□ 1.21
CXCL12P48061 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
CXCL12P48061 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CXCL12P48061 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CXCL12P48061 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CXCL12P48061 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.63■■□□□ 1.21
CXCL12P48061 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CXCL12P48061 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC22.63■■□□□ 1.21
CXCL12P48061 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.63■■□□□ 1.21
CXCL12P48061 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
CXCL12P48061 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.62■■□□□ 1.21
CXCL12P48061 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.62■■□□□ 1.21
CXCL12P48061 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CXCL12P48061 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CXCL12P48061 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.62■■□□□ 1.21
CXCL12P48061 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.62■■□□□ 1.21
CXCL12P48061 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.62■■□□□ 1.21
CXCL12P48061 AC010525.1-201ENST00000585559 441 ntBASIC22.62■■□□□ 1.21
CXCL12P48061 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC22.62■■□□□ 1.21
CXCL12P48061 AL499627.2-201ENST00000606283 725 ntBASIC22.62■■□□□ 1.21
CXCL12P48061 AC080038.1-201ENST00000611274 1154 ntBASIC22.62■■□□□ 1.21
CXCL12P48061 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
CXCL12P48061 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CXCL12P48061 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CXCL12P48061 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CXCL12P48061 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.61■■□□□ 1.21
CXCL12P48061 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
CXCL12P48061 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.61■■□□□ 1.21
CXCL12P48061 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CXCL12P48061 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CXCL12P48061 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.61■■□□□ 1.21
CXCL12P48061 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CXCL12P48061 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CXCL12P48061 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.61■■□□□ 1.21
CXCL12P48061 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
CXCL12P48061 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CXCL12P48061 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
CXCL12P48061 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.6■■□□□ 1.21
CXCL12P48061 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CXCL12P48061 OR2I1P-207ENST00000453522 948 ntBASIC22.6■■□□□ 1.21
CXCL12P48061 AC091060.1-201ENST00000623524 1766 ntBASIC22.6■■□□□ 1.21
CXCL12P48061 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CXCL12P48061 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms