Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 RPN6YDL097C 1305 nt3.35□□□□□ -1.87
VPS55P47111 YPS7YDR349C 1791 nt3.35□□□□□ -1.87
VPS55P47111 RPS11AYDR025W 471 nt3.34□□□□□ -1.87
VPS55P47111 BUD13YGL174W 801 nt3.34□□□□□ -1.87
VPS55P47111 RPS4BYHR203C 786 nt3.34□□□□□ -1.87
VPS55P47111 RPS4AYJR145C 786 nt3.34□□□□□ -1.87
VPS55P47111 CDC42YLR229C 576 nt3.34□□□□□ -1.87
VPS55P47111 YML131WYML131W 1098 nt3.34□□□□□ -1.87
VPS55P47111 YSH1YLR277C 2340 nt3.34□□□□□ -1.87
VPS55P47111 RAD52YML032C 1416 nt3.34□□□□□ -1.88
VPS55P47111 HOF1YMR032W 2010 nt3.34□□□□□ -1.88
VPS55P47111 MET4YNL103W 2019 nt3.34□□□□□ -1.88
VPS55P47111 RPO31YOR116C 4383 nt3.34□□□□□ -1.88
VPS55P47111 SMF1YOL122C 1728 nt3.33□□□□□ -1.88
VPS55P47111 ADP1YCR011C 3150 nt3.33□□□□□ -1.88
VPS55P47111 HOYDL227C 1761 nt3.33□□□□□ -1.88
VPS55P47111 OCA4YCR095C 1089 nt3.33□□□□□ -1.88
VPS55P47111 ENT5YDR153C 1236 nt3.33□□□□□ -1.88
VPS55P47111 tL(UAG)JtL(UAG)J 82 nt3.33□□□□□ -1.88
VPS55P47111 tL(UAG)L1tL(UAG)L1 82 nt3.33□□□□□ -1.88
VPS55P47111 tL(UAG)L2tL(UAG)L2 82 nt3.33□□□□□ -1.88
VPS55P47111 BIO2YGR286C 1128 nt3.33□□□□□ -1.88
VPS55P47111 YLR157W-DYLR157W-D 213 nt3.33□□□□□ -1.88
VPS55P47111 CSR1YLR380W 1227 nt3.33□□□□□ -1.88
VPS55P47111 GPI18YBR004C 1302 nt3.33□□□□□ -1.88
VPS55P47111 RAD57YDR004W 1383 nt3.33□□□□□ -1.88
VPS55P47111 RIA1YNL163C 3333 nt3.33□□□□□ -1.88
VPS55P47111 PRP31YGR091W 1485 nt3.33□□□□□ -1.88
VPS55P47111 GAL11YOL051W 3246 nt3.32□□□□□ -1.88
VPS55P47111 RPC53YDL150W 1269 nt3.32□□□□□ -1.88
VPS55P47111 AST1YBL069W 1290 nt3.32□□□□□ -1.88
VPS55P47111 BRE4YDL231C 3378 nt3.32□□□□□ -1.88
VPS55P47111 KIN2YLR096W 3444 nt3.31□□□□□ -1.88
VPS55P47111 YLR152CYLR152C 1731 nt3.31□□□□□ -1.88
VPS55P47111 LAS1YKR063C 1509 nt3.31□□□□□ -1.88
VPS55P47111 EFB1YAL003W 621 nt3.31□□□□□ -1.88
VPS55P47111 SUA7YPR086W 1038 nt3.31□□□□□ -1.88
VPS55P47111 SPN1YPR133C 1233 nt3.31□□□□□ -1.88
VPS55P47111 ECM22YLR228C 2445 nt3.31□□□□□ -1.88
VPS55P47111 ATG2YNL242W 4779 nt3.3□□□□□ -1.88
VPS55P47111 VPS72YDR485C 2388 nt3.3□□□□□ -1.88
VPS55P47111 WTM1YOR230W 1314 nt3.3□□□□□ -1.88
VPS55P47111 YDR056CYDR056C 618 nt3.3□□□□□ -1.88
VPS55P47111 API2YDR525W 330 nt3.3□□□□□ -1.88
VPS55P47111 PIC2YER053C 903 nt3.3□□□□□ -1.88
VPS55P47111 YDC1YPL087W 954 nt3.3□□□□□ -1.88
VPS55P47111 SPC105YGL093W 2754 nt3.3□□□□□ -1.88
VPS55P47111 HOS3YPL116W 2094 nt3.29□□□□□ -1.88
VPS55P47111 PDR12YPL058C 4536 nt3.29□□□□□ -1.88
VPS55P47111 TRM11YOL124C 1302 nt3.29□□□□□ -1.88
VPS55P47111 PIM1YBL022C 3402 nt3.29□□□□□ -1.88
VPS55P47111 PTC1YDL006W 846 nt3.29□□□□□ -1.88
VPS55P47111 RPL24AYGL031C 468 nt3.29□□□□□ -1.88
VPS55P47111 tQ(UUG)CtQ(UUG)C 72 nt3.29□□□□□ -1.88
VPS55P47111 tQ(UUG)D1tQ(UUG)D1 72 nt3.29□□□□□ -1.88
VPS55P47111 tQ(UUG)D2tQ(UUG)D2 72 nt3.29□□□□□ -1.88
VPS55P47111 tQ(UUG)D3tQ(UUG)D3 72 nt3.29□□□□□ -1.88
VPS55P47111 tQ(UUG)E1tQ(UUG)E1 72 nt3.29□□□□□ -1.88
VPS55P47111 tQ(UUG)HtQ(UUG)H 72 nt3.29□□□□□ -1.88
VPS55P47111 tQ(UUG)LtQ(UUG)L 72 nt3.29□□□□□ -1.88
VPS55P47111 RAD27YKL113C 1149 nt3.29□□□□□ -1.88
VPS55P47111 YMR135W-AYMR135W-A 534 nt3.29□□□□□ -1.88
VPS55P47111 MPP10YJR002W 1782 nt3.29□□□□□ -1.88
VPS55P47111 MSK1YNL073W 1731 nt3.29□□□□□ -1.88
VPS55P47111 PEX30YLR324W 1572 nt3.29□□□□□ -1.88
VPS55P47111 SAP155YFR040W 3009 nt3.28□□□□□ -1.88
VPS55P47111 BUD25YER014C-A 462 nt3.28□□□□□ -1.88
VPS55P47111 MIC26YGR235C 702 nt3.28□□□□□ -1.88
VPS55P47111 YHR193C-AYHR193C-A 375 nt3.28□□□□□ -1.88
VPS55P47111 RDN5-1RDN5-1 121 nt3.28□□□□□ -1.88
VPS55P47111 YAR030CYAR030C 342 nt3.28□□□□□ -1.88
VPS55P47111 RDN5-6RDN5-6 121 nt3.28□□□□□ -1.88
VPS55P47111 MRPL3YMR024W 1173 nt3.28□□□□□ -1.88
VPS55P47111 VPS69YPR087W 321 nt3.28□□□□□ -1.88
VPS55P47111 FRE7YOL152W 1863 nt3.28□□□□□ -1.88
VPS55P47111 VID28YIL017C 2766 nt3.28□□□□□ -1.89
VPS55P47111 CDC14YFR028C 1656 nt3.27□□□□□ -1.89
VPS55P47111 AIM7YDR063W 450 nt3.27□□□□□ -1.89
VPS55P47111 HST4YDR191W 1113 nt3.27□□□□□ -1.89
VPS55P47111 YDR246W-AYDR246W-A 201 nt3.27□□□□□ -1.89
VPS55P47111 AAD6YFL056C 639 nt3.27□□□□□ -1.89
VPS55P47111 NOC2YOR206W 2133 nt3.27□□□□□ -1.89
VPS55P47111 DSS4YPR017C 432 nt3.27□□□□□ -1.89
VPS55P47111 FLC1YPL221W 2382 nt3.27□□□□□ -1.89
VPS55P47111 ALG2YGL065C 1512 nt3.27□□□□□ -1.89
VPS55P47111 YCF1YDR135C 4548 nt3.27□□□□□ -1.89
VPS55P47111 FAS2YPL231W 5664 nt3.27□□□□□ -1.89
VPS55P47111 MAL13YGR288W 1422 nt3.27□□□□□ -1.89
VPS55P47111 TEL1YBL088C 8364 nt3.27□□□□□ -1.89
VPS55P47111 EGT2YNL327W 3126 nt3.26□□□□□ -1.89
VPS55P47111 MET17YLR303W 1335 nt3.26□□□□□ -1.89
VPS55P47111 TMA17YDL110C 453 nt3.26□□□□□ -1.89
VPS55P47111 MRP4YHL004W 1185 nt3.26□□□□□ -1.89
VPS55P47111 MHO1YJR008W 1017 nt3.26□□□□□ -1.89
VPS55P47111 YJR038CYJR038C 363 nt3.26□□□□□ -1.89
VPS55P47111 HEK2YBL032W 1146 nt3.26□□□□□ -1.89
VPS55P47111 YPL025CYPL025C 558 nt3.26□□□□□ -1.89
VPS55P47111 OPY2YPR075C 1083 nt3.26□□□□□ -1.89
VPS55P47111 DIT2YDR402C 1470 nt3.26□□□□□ -1.89
VPS55P47111 RPO21YDL140C 5202 nt3.26□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 15.9 ms