Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
HTTP42858 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
HTTP42858 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
HTTP42858 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.76■■□□□ 1.71
HTTP42858 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
HTTP42858 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.76■■□□□ 1.71
HTTP42858 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC25.75■■□□□ 1.71
HTTP42858 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC25.75■■□□□ 1.71
HTTP42858 TMEM191A-211ENST00000637163 1067 ntBASIC25.75■■□□□ 1.71
HTTP42858 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
HTTP42858 AP005435.1-201ENST00000529293 1178 ntBASIC25.75■■□□□ 1.71
HTTP42858 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC25.75■■□□□ 1.71
HTTP42858 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
HTTP42858 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.74■■□□□ 1.71
HTTP42858 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.74■■□□□ 1.71
HTTP42858 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
HTTP42858 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.74■■□□□ 1.71
HTTP42858 AC016769.1-201ENST00000409132 1010 ntBASIC25.74■■□□□ 1.71
HTTP42858 CD99P1-205ENST00000527459 561 ntBASIC25.74■■□□□ 1.71
HTTP42858 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
HTTP42858 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC25.73■■□□□ 1.71
HTTP42858 pRNA.6-201ENST00000610482 90 ntBASIC25.73■■□□□ 1.71
HTTP42858 pRNA.5-201ENST00000612139 90 ntBASIC25.73■■□□□ 1.71
HTTP42858 pRNA.11-201ENST00000618423 90 ntBASIC25.73■■□□□ 1.71
HTTP42858 pRNA.13-201ENST00000619112 90 ntBASIC25.73■■□□□ 1.71
HTTP42858 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
HTTP42858 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
HTTP42858 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.73■■□□□ 1.71
HTTP42858 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
HTTP42858 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.73■■□□□ 1.71
HTTP42858 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.72■■□□□ 1.71
HTTP42858 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
HTTP42858 AL109923.1-201ENST00000618799 583 ntBASIC25.72■■□□□ 1.71
HTTP42858 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
HTTP42858 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
HTTP42858 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
HTTP42858 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.72■■□□□ 1.71
HTTP42858 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.72■■□□□ 1.71
HTTP42858 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
HTTP42858 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
HTTP42858 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
HTTP42858 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.71■■□□□ 1.71
HTTP42858 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
HTTP42858 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
HTTP42858 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
HTTP42858 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
HTTP42858 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
HTTP42858 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
HTTP42858 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
HTTP42858 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
HTTP42858 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC25.7■■□□□ 1.71
HTTP42858 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.7■■□□□ 1.71
HTTP42858 WT1-AS_3.1-201ENST00000613262 234 ntBASIC25.7■■□□□ 1.71
HTTP42858 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
HTTP42858 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
HTTP42858 SLC6A10P-202ENST00000431994 2058 ntBASIC25.7■■□□□ 1.7
HTTP42858 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
HTTP42858 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
HTTP42858 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC25.7■■□□□ 1.7
HTTP42858 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC25.7■■□□□ 1.7
HTTP42858 AC137761.2-201ENST00000561729 223 ntBASIC25.7■■□□□ 1.7
HTTP42858 AC145350.3-201ENST00000569033 163 ntBASIC25.7■■□□□ 1.7
HTTP42858 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
HTTP42858 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
HTTP42858 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.7■■□□□ 1.7
HTTP42858 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
HTTP42858 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
HTTP42858 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
HTTP42858 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
HTTP42858 LINC02228-203ENST00000641970 1355 ntBASIC25.69■■□□□ 1.7
HTTP42858 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
HTTP42858 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.69■■□□□ 1.7
HTTP42858 AC010501.1-201ENST00000606270 1962 ntBASIC25.69■■□□□ 1.7
HTTP42858 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
HTTP42858 KRT18P6-201ENST00000555540 1265 ntBASIC25.69■■□□□ 1.7
HTTP42858 TPRG1LP1-201ENST00000598702 760 ntBASIC25.69■■□□□ 1.7
HTTP42858 AC006970.2-201ENST00000450065 779 ntBASIC25.68■■□□□ 1.7
HTTP42858 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
HTTP42858 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
HTTP42858 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
HTTP42858 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
HTTP42858 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
HTTP42858 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.68■■□□□ 1.7
HTTP42858 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
HTTP42858 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.68■■□□□ 1.7
HTTP42858 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
HTTP42858 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
HTTP42858 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
HTTP42858 AC008687.6-201ENST00000596318 630 ntBASIC25.67■■□□□ 1.7
HTTP42858 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.67■■□□□ 1.7
HTTP42858 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
HTTP42858 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
HTTP42858 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.66■■□□□ 1.7
HTTP42858 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC25.66■■□□□ 1.7
HTTP42858 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC25.66■■□□□ 1.7
HTTP42858 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
HTTP42858 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC25.66■■□□□ 1.7
HTTP42858 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
HTTP42858 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
HTTP42858 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms