Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CDKN2AP42771 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDKN2AP42771 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CDKN2AP42771 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CDKN2AP42771 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKN2AP42771 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDKN2AP42771 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.1■□□□□ 0.81
CDKN2AP42771 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.1■□□□□ 0.81
CDKN2AP42771 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.1■□□□□ 0.81
CDKN2AP42771 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.1■□□□□ 0.81
CDKN2AP42771 SNX5-217ENST00000606557 1087 ntBASIC20.1■□□□□ 0.81
CDKN2AP42771 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2AP42771 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2AP42771 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.09■□□□□ 0.81
CDKN2AP42771 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2AP42771 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2AP42771 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.09■□□□□ 0.81
CDKN2AP42771 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2AP42771 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.09■□□□□ 0.81
CDKN2AP42771 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.09■□□□□ 0.81
CDKN2AP42771 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDKN2AP42771 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDKN2AP42771 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDKN2AP42771 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CDKN2AP42771 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.08■□□□□ 0.81
CDKN2AP42771 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
CDKN2AP42771 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDKN2AP42771 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDKN2AP42771 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.08■□□□□ 0.81
CDKN2AP42771 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.08■□□□□ 0.81
CDKN2AP42771 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.08■□□□□ 0.81
CDKN2AP42771 AC137630.3-201ENST00000607245 391 ntBASIC20.08■□□□□ 0.81
CDKN2AP42771 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDKN2AP42771 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDKN2AP42771 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.08■□□□□ 0.8
CDKN2AP42771 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.08■□□□□ 0.8
CDKN2AP42771 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN2AP42771 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN2AP42771 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN2AP42771 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN2AP42771 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.07■□□□□ 0.8
CDKN2AP42771 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.07■□□□□ 0.8
CDKN2AP42771 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.07■□□□□ 0.8
CDKN2AP42771 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.07■□□□□ 0.8
CDKN2AP42771 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.07■□□□□ 0.8
CDKN2AP42771 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CDKN2AP42771 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN2AP42771 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
CDKN2AP42771 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDKN2AP42771 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.06■□□□□ 0.8
CDKN2AP42771 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2AP42771 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2AP42771 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2AP42771 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.06■□□□□ 0.8
CDKN2AP42771 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.06■□□□□ 0.8
CDKN2AP42771 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2AP42771 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CDKN2AP42771 AL031848.2-201ENST00000607670 837 ntBASIC20.06■□□□□ 0.8
CDKN2AP42771 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2AP42771 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2AP42771 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2AP42771 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.06■□□□□ 0.8
CDKN2AP42771 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.06■□□□□ 0.8
CDKN2AP42771 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.06■□□□□ 0.8
CDKN2AP42771 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDKN2AP42771 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.05■□□□□ 0.8
CDKN2AP42771 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDKN2AP42771 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CDKN2AP42771 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CDKN2AP42771 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKN2AP42771 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKN2AP42771 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
CDKN2AP42771 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDKN2AP42771 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDKN2AP42771 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDKN2AP42771 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CDKN2AP42771 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKN2AP42771 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.04■□□□□ 0.8
CDKN2AP42771 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKN2AP42771 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKN2AP42771 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDKN2AP42771 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.04■□□□□ 0.8
CDKN2AP42771 AL353803.4-201ENST00000565882 1934 ntBASIC20.04■□□□□ 0.8
CDKN2AP42771 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKN2AP42771 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.03■□□□□ 0.8
CDKN2AP42771 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.03■□□□□ 0.8
CDKN2AP42771 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKN2AP42771 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKN2AP42771 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.03■□□□□ 0.8
CDKN2AP42771 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDKN2AP42771 EP400NL-214ENST00000641289 2402 ntBASIC20.03■□□□□ 0.8
CDKN2AP42771 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKN2AP42771 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.02■□□□□ 0.8
CDKN2AP42771 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CDKN2AP42771 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKN2AP42771 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKN2AP42771 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDKN2AP42771 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CDKN2AP42771 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDKN2AP42771 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms