Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 TFG1YGR186W 2208 nt5.74□□□□□ -1.49
VPS27P40343 MED2YDL005C 1296 nt5.74□□□□□ -1.49
VPS27P40343 YDL012CYDL012C 324 nt5.74□□□□□ -1.49
VPS27P40343 ARF2YDL137W 546 nt5.74□□□□□ -1.49
VPS27P40343 YDL183CYDL183C 963 nt5.74□□□□□ -1.49
VPS27P40343 TYW3YGL050W 822 nt5.74□□□□□ -1.49
VPS27P40343 GPP1YIL053W 753 nt5.74□□□□□ -1.49
VPS27P40343 YAL047W-AYAL047W-A 330 nt5.74□□□□□ -1.49
VPS27P40343 YLR036CYLR036C 612 nt5.74□□□□□ -1.49
VPS27P40343 ECM15YBL001C 315 nt5.74□□□□□ -1.49
VPS27P40343 YNL296WYNL296W 315 nt5.74□□□□□ -1.49
VPS27P40343 ECM33YBR078W 1290 nt5.74□□□□□ -1.49
VPS27P40343 EGT2YNL327W 3126 nt5.74□□□□□ -1.49
VPS27P40343 PEX29YDR479C 1665 nt5.73□□□□□ -1.49
VPS27P40343 tK(CUU)CtK(CUU)C 73 nt5.73□□□□□ -1.49
VPS27P40343 tK(CUU)D1tK(CUU)D1 73 nt5.73□□□□□ -1.49
VPS27P40343 tK(CUU)D2tK(CUU)D2 73 nt5.73□□□□□ -1.49
VPS27P40343 tK(CUU)E1tK(CUU)E1 73 nt5.73□□□□□ -1.49
VPS27P40343 tK(CUU)E2tK(CUU)E2 73 nt5.73□□□□□ -1.49
VPS27P40343 tK(CUU)FtK(CUU)F 73 nt5.73□□□□□ -1.49
VPS27P40343 tK(CUU)G1tK(CUU)G1 73 nt5.73□□□□□ -1.49
VPS27P40343 tK(CUU)G2tK(CUU)G2 73 nt5.73□□□□□ -1.49
VPS27P40343 tK(CUU)G3tK(CUU)G3 73 nt5.73□□□□□ -1.49
VPS27P40343 tK(CUU)ItK(CUU)I 73 nt5.73□□□□□ -1.49
VPS27P40343 tK(CUU)JtK(CUU)J 73 nt5.73□□□□□ -1.49
VPS27P40343 tK(CUU)KtK(CUU)K 73 nt5.73□□□□□ -1.49
VPS27P40343 tK(CUU)MtK(CUU)M 73 nt5.73□□□□□ -1.49
VPS27P40343 tK(CUU)PtK(CUU)P 73 nt5.73□□□□□ -1.49
VPS27P40343 YHR212W-AYHR212W-A 204 nt5.73□□□□□ -1.49
VPS27P40343 YAR061WYAR061W 204 nt5.73□□□□□ -1.49
VPS27P40343 YMR105W-AYMR105W-A 195 nt5.73□□□□□ -1.49
VPS27P40343 OAZ1YPL052W 879 nt5.73□□□□□ -1.49
VPS27P40343 PDR15YDR406W 4590 nt5.73□□□□□ -1.49
VPS27P40343 CLF1YLR117C 2064 nt5.73□□□□□ -1.49
VPS27P40343 PAF1YBR279W 1338 nt5.73□□□□□ -1.49
VPS27P40343 UBA2YDR390C 1911 nt5.72□□□□□ -1.49
VPS27P40343 MLF3YNL074C 1359 nt5.72□□□□□ -1.49
VPS27P40343 UBC1YDR177W 648 nt5.72□□□□□ -1.49
VPS27P40343 PFA5YDR459C 1125 nt5.72□□□□□ -1.49
VPS27P40343 ACT1YFL039C 1128 nt5.72□□□□□ -1.49
VPS27P40343 CUS2YNL286W 858 nt5.72□□□□□ -1.49
VPS27P40343 YPL073CYPL073C 486 nt5.72□□□□□ -1.49
VPS27P40343 YBR196C-BYBR196C-B 105 nt5.72□□□□□ -1.49
VPS27P40343 MAL13YGR288W 1422 nt5.72□□□□□ -1.49
VPS27P40343 PAN1YIR006C 4443 nt5.71□□□□□ -1.49
VPS27P40343 RAD57YDR004W 1383 nt5.71□□□□□ -1.5
VPS27P40343 EKI1YDR147W 1605 nt5.71□□□□□ -1.5
VPS27P40343 NMD3YHR170W 1557 nt5.71□□□□□ -1.5
VPS27P40343 CPS1YJL172W 1731 nt5.71□□□□□ -1.5
VPS27P40343 FKH1YIL131C 1455 nt5.71□□□□□ -1.5
VPS27P40343 PEX19YDL065C 1029 nt5.7□□□□□ -1.5
VPS27P40343 tS(AGA)D3tS(AGA)D3 83 nt5.7□□□□□ -1.5
VPS27P40343 YLR124WYLR124W 345 nt5.7□□□□□ -1.5
VPS27P40343 YLR125WYLR125W 411 nt5.7□□□□□ -1.5
VPS27P40343 YIM1YMR152W 1098 nt5.7□□□□□ -1.5
VPS27P40343 YNL134CYNL134C 1131 nt5.7□□□□□ -1.5
VPS27P40343 YNL143CYNL143C 393 nt5.7□□□□□ -1.5
VPS27P40343 CIN5YOR028C 888 nt5.7□□□□□ -1.5
VPS27P40343 CAB3YKL088W 1716 nt5.69□□□□□ -1.5
VPS27P40343 SPR28YDR218C 1272 nt5.69□□□□□ -1.5
VPS27P40343 NVJ1YHR195W 966 nt5.69□□□□□ -1.5
VPS27P40343 YBR016WYBR016W 387 nt5.69□□□□□ -1.5
VPS27P40343 NRG2YBR066C 663 nt5.69□□□□□ -1.5
VPS27P40343 THI22YPR121W 1719 nt5.68□□□□□ -1.5
VPS27P40343 MSC7YHR039C 1935 nt5.68□□□□□ -1.5
VPS27P40343 MCM21YDR318W 1107 nt5.68□□□□□ -1.5
VPS27P40343 SCS2YER120W 735 nt5.68□□□□□ -1.5
VPS27P40343 YLF2YHL014C 1218 nt5.68□□□□□ -1.5
VPS27P40343 LNP1YHR192W 837 nt5.68□□□□□ -1.5
VPS27P40343 YNL234WYNL234W 1281 nt5.68□□□□□ -1.5
VPS27P40343 GRE1YPL223C 507 nt5.68□□□□□ -1.5
VPS27P40343 ISA2YPR067W 558 nt5.68□□□□□ -1.5
VPS27P40343 ARC40YBR234C 1155 nt5.68□□□□□ -1.5
VPS27P40343 SAS10YDL153C 1833 nt5.68□□□□□ -1.5
VPS27P40343 FRE1YLR214W 2061 nt5.68□□□□□ -1.5
VPS27P40343 GAD1YMR250W 1758 nt5.67□□□□□ -1.5
VPS27P40343 NUP2YLR335W 2163 nt5.67□□□□□ -1.5
VPS27P40343 SWC3YAL011W 1878 nt5.67□□□□□ -1.5
VPS27P40343 EAR1YMR171C 1653 nt5.67□□□□□ -1.5
VPS27P40343 NOC4YPR144C 1659 nt5.67□□□□□ -1.5
VPS27P40343 RNA15YGL044C 891 nt5.67□□□□□ -1.5
VPS27P40343 TVP38YKR088C 1014 nt5.67□□□□□ -1.5
VPS27P40343 FBP1YLR377C 1047 nt5.67□□□□□ -1.5
VPS27P40343 TDA11YHR159W 1515 nt5.67□□□□□ -1.5
VPS27P40343 TMN2YDR107C 2019 nt5.67□□□□□ -1.5
VPS27P40343 PAH1YMR165C 2589 nt5.66□□□□□ -1.5
VPS27P40343 IMA3YIL172C 1770 nt5.66□□□□□ -1.5
VPS27P40343 IMA4YJL221C 1770 nt5.66□□□□□ -1.5
VPS27P40343 MHO1YJR008W 1017 nt5.66□□□□□ -1.5
VPS27P40343 YJR012CYJR012C 624 nt5.66□□□□□ -1.5
VPS27P40343 KCC4YCL024W 3114 nt5.66□□□□□ -1.5
VPS27P40343 YTA6YPL074W 2265 nt5.65□□□□□ -1.5
VPS27P40343 TRE1YPL176C 2352 nt5.65□□□□□ -1.5
VPS27P40343 HSP31YDR533C 714 nt5.65□□□□□ -1.5
VPS27P40343 MOB2YFL034C-B 864 nt5.65□□□□□ -1.5
VPS27P40343 NPY1YGL067W 1155 nt5.65□□□□□ -1.5
VPS27P40343 YIL086CYIL086C 309 nt5.65□□□□□ -1.5
VPS27P40343 LSO1YJR005C-A 282 nt5.65□□□□□ -1.5
VPS27P40343 YNG1YOR064C 660 nt5.65□□□□□ -1.5
VPS27P40343 ERG4YGL012W 1422 nt5.65□□□□□ -1.51
Retrieved 100 of 7,029 protein–RNA pairs in 67.9 ms