Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 IMD2YHR216W 1572 nt4.4□□□□□ -1.7
TDA11P38854 CNL1YDR357C 369 nt4.4□□□□□ -1.71
TDA11P38854 YGR011WYGR011W 327 nt4.4□□□□□ -1.71
TDA11P38854 SLZ1YNL196C 897 nt4.4□□□□□ -1.71
TDA11P38854 OAZ1YPL052W 879 nt4.4□□□□□ -1.71
TDA11P38854 SUA7YPR086W 1038 nt4.4□□□□□ -1.71
TDA11P38854 NOC2YOR206W 2133 nt4.39□□□□□ -1.71
TDA11P38854 PRE9YGR135W 777 nt4.39□□□□□ -1.71
TDA11P38854 NTR2YKR022C 969 nt4.39□□□□□ -1.71
TDA11P38854 YAR030CYAR030C 342 nt4.39□□□□□ -1.71
TDA11P38854 YNL217WYNL217W 981 nt4.39□□□□□ -1.71
TDA11P38854 YHR177WYHR177W 1362 nt4.39□□□□□ -1.71
TDA11P38854 SAC1YKL212W 1872 nt4.39□□□□□ -1.71
TDA11P38854 PRM1YNL279W 1986 nt4.38□□□□□ -1.71
TDA11P38854 MKS1YNL076W 1755 nt4.38□□□□□ -1.71
TDA11P38854 RPS11AYDR025W 471 nt4.38□□□□□ -1.71
TDA11P38854 YAL044W-AYAL044W-A 333 nt4.38□□□□□ -1.71
TDA11P38854 MRPL39YML009C 213 nt4.38□□□□□ -1.71
TDA11P38854 YMR082CYMR082C 357 nt4.38□□□□□ -1.71
TDA11P38854 ARG8YOL140W 1272 nt4.38□□□□□ -1.71
TDA11P38854 ECM22YLR228C 2445 nt4.38□□□□□ -1.71
TDA11P38854 SAP155YFR040W 3009 nt4.38□□□□□ -1.71
TDA11P38854 VID28YIL017C 2766 nt4.38□□□□□ -1.71
TDA11P38854 LPL1YOR059C 1353 nt4.38□□□□□ -1.71
TDA11P38854 YAP1802YGR241C 1707 nt4.38□□□□□ -1.71
TDA11P38854 FAR10YLR238W 1437 nt4.38□□□□□ -1.71
TDA11P38854 ARH1YDR376W 1482 nt4.37□□□□□ -1.71
TDA11P38854 HRR25YPL204W 1485 nt4.37□□□□□ -1.71
TDA11P38854 APC4YDR118W 1959 nt4.37□□□□□ -1.71
TDA11P38854 RNA15YGL044C 891 nt4.37□□□□□ -1.71
TDA11P38854 BUD13YGL174W 801 nt4.37□□□□□ -1.71
TDA11P38854 RPP0YLR340W 939 nt4.37□□□□□ -1.71
TDA11P38854 IMP2YMR035W 534 nt4.37□□□□□ -1.71
TDA11P38854 YNL134CYNL134C 1131 nt4.37□□□□□ -1.71
TDA11P38854 YIF1YNL263C 945 nt4.37□□□□□ -1.71
TDA11P38854 IBA57YJR122W 1494 nt4.37□□□□□ -1.71
TDA11P38854 GSH2YOL049W 1476 nt4.37□□□□□ -1.71
TDA11P38854 ULS1YOR191W 4860 nt4.37□□□□□ -1.71
TDA11P38854 TEL1YBL088C 8364 nt4.36□□□□□ -1.71
TDA11P38854 ATM1YMR301C 2073 nt4.36□□□□□ -1.71
TDA11P38854 VMA1YDL185W 3216 nt4.36□□□□□ -1.71
TDA11P38854 HSP31YDR533C 714 nt4.36□□□□□ -1.71
TDA11P38854 BNA6YFR047C 888 nt4.36□□□□□ -1.71
TDA11P38854 YIL171W-AYIL171W-A 453 nt4.36□□□□□ -1.71
TDA11P38854 YJL220WYJL220W 453 nt4.36□□□□□ -1.71
TDA11P38854 CCS1YMR038C 750 nt4.36□□□□□ -1.71
TDA11P38854 RKM2YDR198C 1440 nt4.36□□□□□ -1.71
TDA11P38854 FZO1YBR179C 2568 nt4.36□□□□□ -1.71
TDA11P38854 YDR132CYDR132C 1488 nt4.36□□□□□ -1.71
TDA11P38854 MAD3YJL013C 1548 nt4.36□□□□□ -1.71
TDA11P38854 NHX1YDR456W 1902 nt4.35□□□□□ -1.71
TDA11P38854 MIS1YBR084W 2928 nt4.35□□□□□ -1.71
TDA11P38854 UBC1YDR177W 648 nt4.35□□□□□ -1.71
TDA11P38854 NOP16YER002W 696 nt4.35□□□□□ -1.71
TDA11P38854 PCL6YER059W 1263 nt4.35□□□□□ -1.71
TDA11P38854 YLF2YHL014C 1218 nt4.35□□□□□ -1.71
TDA11P38854 YAR019W-AYAR019W-A 333 nt4.35□□□□□ -1.71
TDA11P38854 YBR196C-BYBR196C-B 105 nt4.35□□□□□ -1.71
TDA11P38854 MSC2YDR205W 2175 nt4.34□□□□□ -1.71
TDA11P38854 GCV1YDR019C 1203 nt4.34□□□□□ -1.71
TDA11P38854 ARG82YDR173C 1068 nt4.34□□□□□ -1.71
TDA11P38854 SNA2YDR525W-A 240 nt4.34□□□□□ -1.71
TDA11P38854 YER133W-AYER133W-A 342 nt4.34□□□□□ -1.71
TDA11P38854 LSO1YJR005C-A 282 nt4.34□□□□□ -1.71
TDA11P38854 YPL014WYPL014W 1146 nt4.34□□□□□ -1.71
TDA11P38854 RMI1YPL024W 726 nt4.34□□□□□ -1.71
TDA11P38854 YPL199CYPL199C 723 nt4.34□□□□□ -1.71
TDA11P38854 EMP47YFL048C 1338 nt4.34□□□□□ -1.71
TDA11P38854 PUT1YLR142W 1431 nt4.34□□□□□ -1.71
TDA11P38854 CDC14YFR028C 1656 nt4.34□□□□□ -1.71
TDA11P38854 KCC4YCL024W 3114 nt4.34□□□□□ -1.72
TDA11P38854 THI7YLR237W 1797 nt4.33□□□□□ -1.72
TDA11P38854 NUG1YER006W 1563 nt4.33□□□□□ -1.72
TDA11P38854 LDB17YDL146W 1476 nt4.33□□□□□ -1.72
TDA11P38854 SOL4YGR248W 768 nt4.33□□□□□ -1.72
TDA11P38854 SPC42YKL042W 1092 nt4.33□□□□□ -1.72
TDA11P38854 YPR169W-AYPR169W-A 219 nt4.33□□□□□ -1.72
TDA11P38854 YPR170W-BYPR170W-B 258 nt4.33□□□□□ -1.72
TDA11P38854 REI1YBR267W 1182 nt4.33□□□□□ -1.72
TDA11P38854 YND1YER005W 1893 nt4.32□□□□□ -1.72
TDA11P38854 SRO7YPR032W 3102 nt4.32□□□□□ -1.72
TDA11P38854 ATG2YNL242W 4779 nt4.32□□□□□ -1.72
TDA11P38854 YDL183CYDL183C 963 nt4.32□□□□□ -1.72
TDA11P38854 SPR28YDR218C 1272 nt4.32□□□□□ -1.72
TDA11P38854 YER134CYER134C 537 nt4.32□□□□□ -1.72
TDA11P38854 SPO74YGL170C 1242 nt4.32□□□□□ -1.72
TDA11P38854 NAT5YOR253W 531 nt4.32□□□□□ -1.72
TDA11P38854 YOR289WYOR289W 756 nt4.32□□□□□ -1.72
TDA11P38854 IFM1YOL023W 2031 nt4.31□□□□□ -1.72
TDA11P38854 YMR111CYMR111C 1389 nt4.31□□□□□ -1.72
TDA11P38854 YDL027CYDL027C 1263 nt4.31□□□□□ -1.72
TDA11P38854 TOM20YGR082W 552 nt4.31□□□□□ -1.72
TDA11P38854 GRE3YHR104W 984 nt4.31□□□□□ -1.72
TDA11P38854 NVJ1YHR195W 966 nt4.31□□□□□ -1.72
TDA11P38854 MRPL24YMR193W 777 nt4.31□□□□□ -1.72
TDA11P38854 CUZ1YNL155W 825 nt4.31□□□□□ -1.72
TDA11P38854 PBN1YCL052C 1251 nt4.31□□□□□ -1.72
TDA11P38854 SMF1YOL122C 1728 nt4.31□□□□□ -1.72
TDA11P38854 HIR2YOR038C 2628 nt4.31□□□□□ -1.72
TDA11P38854 SAF1YBR280C 1914 nt4.31□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 31.1 ms