Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABRA3P34903 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABRA3P34903 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABRA3P34903 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.91■□□□□ 0.94
GABRA3P34903 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABRA3P34903 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
GABRA3P34903 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.91■□□□□ 0.94
GABRA3P34903 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.91■□□□□ 0.94
GABRA3P34903 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.91■□□□□ 0.94
GABRA3P34903 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
GABRA3P34903 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
GABRA3P34903 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GABRA3P34903 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GABRA3P34903 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GABRA3P34903 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GABRA3P34903 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.9■□□□□ 0.94
GABRA3P34903 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
GABRA3P34903 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GABRA3P34903 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GABRA3P34903 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.9■□□□□ 0.94
GABRA3P34903 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GABRA3P34903 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.89■□□□□ 0.94
GABRA3P34903 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
GABRA3P34903 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GABRA3P34903 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GABRA3P34903 KRT16P3-201ENST00000439127 1283 ntBASIC20.89■□□□□ 0.93
GABRA3P34903 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.89■□□□□ 0.93
GABRA3P34903 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.88■□□□□ 0.93
GABRA3P34903 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA3P34903 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.88■□□□□ 0.93
GABRA3P34903 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA3P34903 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
GABRA3P34903 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA3P34903 AC079630.1-202ENST00000618127 1840 ntBASIC20.88■□□□□ 0.93
GABRA3P34903 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA3P34903 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA3P34903 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA3P34903 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA3P34903 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
GABRA3P34903 MIR6724-1-201ENST00000616420 92 ntBASIC20.88■□□□□ 0.93
GABRA3P34903 MIR6724-2-201ENST00000616483 92 ntBASIC20.88■□□□□ 0.93
GABRA3P34903 MIR6724-4-201ENST00000617390 92 ntBASIC20.88■□□□□ 0.93
GABRA3P34903 MIR6724-3-201ENST00000622482 92 ntBASIC20.88■□□□□ 0.93
GABRA3P34903 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA3P34903 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA3P34903 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
GABRA3P34903 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GABRA3P34903 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.88■□□□□ 0.93
GABRA3P34903 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GABRA3P34903 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
GABRA3P34903 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.87■□□□□ 0.93
GABRA3P34903 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GABRA3P34903 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.87■□□□□ 0.93
GABRA3P34903 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
GABRA3P34903 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GABRA3P34903 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
GABRA3P34903 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
GABRA3P34903 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GABRA3P34903 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GABRA3P34903 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.86■□□□□ 0.93
GABRA3P34903 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.86■□□□□ 0.93
GABRA3P34903 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GABRA3P34903 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GABRA3P34903 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GABRA3P34903 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
GABRA3P34903 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GABRA3P34903 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GABRA3P34903 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.86■□□□□ 0.93
GABRA3P34903 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GABRA3P34903 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GABRA3P34903 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.85■□□□□ 0.93
GABRA3P34903 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.85■□□□□ 0.93
GABRA3P34903 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GABRA3P34903 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.85■□□□□ 0.93
GABRA3P34903 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.85■□□□□ 0.93
GABRA3P34903 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
GABRA3P34903 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.85■□□□□ 0.93
GABRA3P34903 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GABRA3P34903 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.85■□□□□ 0.93
GABRA3P34903 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
GABRA3P34903 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.84■□□□□ 0.93
GABRA3P34903 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.84■□□□□ 0.93
GABRA3P34903 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
GABRA3P34903 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.84■□□□□ 0.93
GABRA3P34903 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.84■□□□□ 0.93
GABRA3P34903 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GABRA3P34903 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GABRA3P34903 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GABRA3P34903 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.84■□□□□ 0.93
GABRA3P34903 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.84■□□□□ 0.93
GABRA3P34903 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.84■□□□□ 0.93
GABRA3P34903 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.84■□□□□ 0.93
GABRA3P34903 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GABRA3P34903 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
GABRA3P34903 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.84■□□□□ 0.93
GABRA3P34903 DUSP8P3-201ENST00000399571 1760 ntBASIC20.84■□□□□ 0.93
GABRA3P34903 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.84■□□□□ 0.93
GABRA3P34903 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
GABRA3P34903 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
GABRA3P34903 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms