Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.15■□□□□ 0.82
SDHAP31040 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAP31040 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.15■□□□□ 0.82
SDHAP31040 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAP31040 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.15■□□□□ 0.82
SDHAP31040 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAP31040 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.15■□□□□ 0.82
SDHAP31040 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAP31040 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SDHAP31040 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SDHAP31040 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHAP31040 AC079834.2-201ENST00000609776 1949 ntBASIC20.14■□□□□ 0.81
SDHAP31040 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHAP31040 AL031848.2-201ENST00000607670 837 ntBASIC20.14■□□□□ 0.81
SDHAP31040 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.14■□□□□ 0.81
SDHAP31040 C1orf229-201ENST00000623686 2258 ntBASIC20.14■□□□□ 0.81
SDHAP31040 AC233723.2-201ENST00000623798 2106 ntBASIC20.14■□□□□ 0.81
SDHAP31040 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
SDHAP31040 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SDHAP31040 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SDHAP31040 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SDHAP31040 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHAP31040 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.13■□□□□ 0.81
SDHAP31040 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHAP31040 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SDHAP31040 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.13■□□□□ 0.81
SDHAP31040 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHAP31040 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
SDHAP31040 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SDHAP31040 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.13■□□□□ 0.81
SDHAP31040 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SDHAP31040 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHAP31040 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHAP31040 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SDHAP31040 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SDHAP31040 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SDHAP31040 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.12■□□□□ 0.81
SDHAP31040 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.12■□□□□ 0.81
SDHAP31040 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SDHAP31040 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.12■□□□□ 0.81
SDHAP31040 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.12■□□□□ 0.81
SDHAP31040 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SDHAP31040 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SDHAP31040 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHAP31040 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SDHAP31040 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHAP31040 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SDHAP31040 AL117328.2-201ENST00000624617 1940 ntBASIC20.12■□□□□ 0.81
SDHAP31040 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.11■□□□□ 0.81
SDHAP31040 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SDHAP31040 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SDHAP31040 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SDHAP31040 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
SDHAP31040 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.11■□□□□ 0.81
SDHAP31040 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SDHAP31040 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
SDHAP31040 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.11■□□□□ 0.81
SDHAP31040 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SDHAP31040 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.1■□□□□ 0.81
SDHAP31040 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SDHAP31040 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SDHAP31040 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SDHAP31040 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SDHAP31040 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SDHAP31040 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SDHAP31040 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.1■□□□□ 0.81
SDHAP31040 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SDHAP31040 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.1■□□□□ 0.81
SDHAP31040 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.1■□□□□ 0.81
SDHAP31040 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SDHAP31040 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
SDHAP31040 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SDHAP31040 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SDHAP31040 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SDHAP31040 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SDHAP31040 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SDHAP31040 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.09■□□□□ 0.81
SDHAP31040 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.09■□□□□ 0.81
SDHAP31040 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SDHAP31040 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SDHAP31040 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SDHAP31040 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.09■□□□□ 0.81
SDHAP31040 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SDHAP31040 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.08■□□□□ 0.81
SDHAP31040 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SDHAP31040 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SDHAP31040 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SDHAP31040 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.08■□□□□ 0.81
SDHAP31040 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.08■□□□□ 0.81
SDHAP31040 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
SDHAP31040 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SDHAP31040 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SDHAP31040 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SDHAP31040 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SDHAP31040 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SDHAP31040 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.07■□□□□ 0.8
SDHAP31040 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SDHAP31040 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SDHAP31040 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.07■□□□□ 0.8
SDHAP31040 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms