Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
MMP11P24347 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP11P24347 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
MMP11P24347 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MMP11P24347 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.35■■□□□ 1.01
MMP11P24347 AC135279.3-201ENST00000610945 1311 ntBASIC21.34■■□□□ 1.01
MMP11P24347 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MMP11P24347 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MMP11P24347 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MMP11P24347 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
MMP11P24347 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
MMP11P24347 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MMP11P24347 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MMP11P24347 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MMP11P24347 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.33■■□□□ 1.01
MMP11P24347 MIR935-201ENST00000401179 91 ntBASIC21.33■■□□□ 1.01
MMP11P24347 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.33■■□□□ 1
MMP11P24347 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
MMP11P24347 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.33■■□□□ 1
MMP11P24347 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
MMP11P24347 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
MMP11P24347 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.32■■□□□ 1
MMP11P24347 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.32■■□□□ 1
MMP11P24347 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
MMP11P24347 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.32■■□□□ 1
MMP11P24347 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.32■■□□□ 1
MMP11P24347 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
MMP11P24347 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MMP11P24347 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
MMP11P24347 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.32■■□□□ 1
MMP11P24347 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.32■■□□□ 1
MMP11P24347 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.32■■□□□ 1
MMP11P24347 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.32■■□□□ 1
MMP11P24347 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.32■■□□□ 1
MMP11P24347 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MMP11P24347 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MMP11P24347 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.31■■□□□ 1
MMP11P24347 AC009102.2-201ENST00000606772 1639 ntBASIC21.31■■□□□ 1
MMP11P24347 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.31■■□□□ 1
MMP11P24347 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MMP11P24347 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.31■■□□□ 1
MMP11P24347 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.31■■□□□ 1
MMP11P24347 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
MMP11P24347 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.3■■□□□ 1
MMP11P24347 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
MMP11P24347 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.3■■□□□ 1
MMP11P24347 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.3■■□□□ 1
MMP11P24347 AC024257.2-201ENST00000549699 147 ntBASIC21.3■■□□□ 1
MMP11P24347 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
MMP11P24347 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.3■■□□□ 1
MMP11P24347 AC068473.5-201ENST00000616428 2072 ntBASIC21.3■■□□□ 1
MMP11P24347 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.3■■□□□ 1
MMP11P24347 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.29■■□□□ 1
MMP11P24347 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP11P24347 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
MMP11P24347 AC012676.1-201ENST00000574705 1949 ntBASIC21.29■■□□□ 1
MMP11P24347 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
MMP11P24347 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.29■■□□□ 1
MMP11P24347 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP11P24347 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP11P24347 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
MMP11P24347 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
MMP11P24347 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
MMP11P24347 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
MMP11P24347 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
MMP11P24347 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
MMP11P24347 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.29■■□□□ 1
MMP11P24347 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP11P24347 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.29■■□□□ 1
MMP11P24347 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.29■■□□□ 1
MMP11P24347 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
MMP11P24347 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MMP11P24347 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
MMP11P24347 SYT6-210ENST00000641643 1587 ntBASIC21.28■■□□□ 1
MMP11P24347 EDA-201ENST00000338901 1233 ntBASIC21.28■■□□□ 1
MMP11P24347 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
MMP11P24347 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.28■■□□□ 1
MMP11P24347 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.28■■□□□ 1
MMP11P24347 AC142381.2-201ENST00000566120 298 ntBASIC21.28■■□□□ 1
MMP11P24347 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.28■■□□□ 1
MMP11P24347 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP11P24347 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
MMP11P24347 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.28■■□□□ 1
MMP11P24347 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
MMP11P24347 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.27■■□□□ 1
MMP11P24347 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.27■■□□□ 1
MMP11P24347 DUSP8P5-201ENST00000422884 1815 ntBASIC21.27■■□□□ 1
MMP11P24347 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.27■■□□□ 1
MMP11P24347 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP11P24347 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.27■■□□□ 1
MMP11P24347 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP11P24347 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
MMP11P24347 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
MMP11P24347 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
MMP11P24347 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP11P24347 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP11P24347 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.26■□□□□ 0.99
MMP11P24347 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MMP11P24347 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MMP11P24347 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms