Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC28.05■■■□□ 2.08
KCNA3P22001 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
KCNA3P22001 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC28.05■■■□□ 2.08
KCNA3P22001 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC28.05■■■□□ 2.08
KCNA3P22001 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
KCNA3P22001 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC28.05■■■□□ 2.08
KCNA3P22001 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.05■■■□□ 2.08
KCNA3P22001 MIR6089-201ENST00000616698 64 ntBASIC28.05■■■□□ 2.08
KCNA3P22001 AC091060.1-201ENST00000623524 1766 ntBASIC28.05■■■□□ 2.08
KCNA3P22001 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
KCNA3P22001 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
KCNA3P22001 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
KCNA3P22001 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
KCNA3P22001 LHPP-203ENST00000392757 840 ntTSL 3 BASIC28.04■■■□□ 2.08
KCNA3P22001 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC28.04■■■□□ 2.08
KCNA3P22001 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC28.04■■■□□ 2.08
KCNA3P22001 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC28.04■■■□□ 2.08
KCNA3P22001 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC28.04■■■□□ 2.08
KCNA3P22001 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
KCNA3P22001 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
KCNA3P22001 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC28.03■■■□□ 2.08
KCNA3P22001 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
KCNA3P22001 AC026185.1-201ENST00000445748 174 ntBASIC28.03■■■□□ 2.08
KCNA3P22001 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
KCNA3P22001 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC28.03■■■□□ 2.08
KCNA3P22001 AP005435.1-201ENST00000529293 1178 ntBASIC28.03■■■□□ 2.08
KCNA3P22001 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
KCNA3P22001 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC28.03■■■□□ 2.08
KCNA3P22001 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
KCNA3P22001 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC28.03■■■□□ 2.08
KCNA3P22001 AC133637.1-201ENST00000624115 1537 ntBASIC28.02■■■□□ 2.08
KCNA3P22001 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
KCNA3P22001 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
KCNA3P22001 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
KCNA3P22001 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.02■■■□□ 2.08
KCNA3P22001 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
KCNA3P22001 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
KCNA3P22001 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC28.02■■■□□ 2.08
KCNA3P22001 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
KCNA3P22001 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
KCNA3P22001 MPST-204ENST00000404393 1329 ntTSL 5 BASIC28.01■■■□□ 2.07
KCNA3P22001 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
KCNA3P22001 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
KCNA3P22001 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC28.01■■■□□ 2.07
KCNA3P22001 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC28.01■■■□□ 2.07
KCNA3P22001 CROCCP5-201ENST00000436658 830 ntBASIC28.01■■■□□ 2.07
KCNA3P22001 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC28.01■■■□□ 2.07
KCNA3P22001 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC28.01■■■□□ 2.07
KCNA3P22001 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC28.01■■■□□ 2.07
KCNA3P22001 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
KCNA3P22001 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
KCNA3P22001 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
KCNA3P22001 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
KCNA3P22001 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
KCNA3P22001 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
KCNA3P22001 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC28.01■■■□□ 2.07
KCNA3P22001 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC28■■■□□ 2.07
KCNA3P22001 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
KCNA3P22001 GAS2L1P2-201ENST00000436355 1356 ntBASIC28■■■□□ 2.07
KCNA3P22001 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28■■■□□ 2.07
KCNA3P22001 STX7-201ENST00000367937 1090 ntTSL 5 BASIC28■■■□□ 2.07
KCNA3P22001 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
KCNA3P22001 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC28■■■□□ 2.07
KCNA3P22001 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC28■■■□□ 2.07
KCNA3P22001 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC28■■■□□ 2.07
KCNA3P22001 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
KCNA3P22001 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27.99■■■□□ 2.07
KCNA3P22001 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
KCNA3P22001 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC27.99■■■□□ 2.07
KCNA3P22001 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
KCNA3P22001 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
KCNA3P22001 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
KCNA3P22001 HSCB-202ENST00000398941 955 ntTSL 2 BASIC27.99■■■□□ 2.07
KCNA3P22001 AC137761.2-201ENST00000561729 223 ntBASIC27.99■■■□□ 2.07
KCNA3P22001 AC145350.3-201ENST00000569033 163 ntBASIC27.99■■■□□ 2.07
KCNA3P22001 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
KCNA3P22001 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC27.99■■■□□ 2.07
KCNA3P22001 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
KCNA3P22001 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC27.99■■■□□ 2.07
KCNA3P22001 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
KCNA3P22001 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
KCNA3P22001 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC27.98■■■□□ 2.07
KCNA3P22001 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC27.98■■■□□ 2.07
KCNA3P22001 AC066615.1-201ENST00000640911 628 ntBASIC27.98■■■□□ 2.07
KCNA3P22001 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
KCNA3P22001 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
KCNA3P22001 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
KCNA3P22001 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
KCNA3P22001 AL355802.2-201ENST00000402069 882 ntBASIC27.97■■■□□ 2.07
KCNA3P22001 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
KCNA3P22001 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
KCNA3P22001 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
KCNA3P22001 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC27.97■■■□□ 2.07
KCNA3P22001 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
KCNA3P22001 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
KCNA3P22001 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
KCNA3P22001 AC016769.1-201ENST00000409132 1010 ntBASIC27.96■■■□□ 2.07
KCNA3P22001 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC27.96■■■□□ 2.07
KCNA3P22001 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
KCNA3P22001 AL109923.1-201ENST00000618799 583 ntBASIC27.96■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms