Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.64■□□□□ 0.57
ATF4P18848 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATF4P18848 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATF4P18848 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF4P18848 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF4P18848 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF4P18848 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.63■□□□□ 0.57
ATF4P18848 HSD17B1P1-201ENST00000590052 955 ntBASIC18.63■□□□□ 0.57
ATF4P18848 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ATF4P18848 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
ATF4P18848 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ATF4P18848 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.63■□□□□ 0.57
ATF4P18848 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ATF4P18848 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATF4P18848 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATF4P18848 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ATF4P18848 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF4P18848 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATF4P18848 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ATF4P18848 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ATF4P18848 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.62■□□□□ 0.57
ATF4P18848 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
ATF4P18848 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF4P18848 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF4P18848 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF4P18848 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATF4P18848 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF4P18848 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF4P18848 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATF4P18848 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.61■□□□□ 0.57
ATF4P18848 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
ATF4P18848 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ATF4P18848 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF4P18848 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
ATF4P18848 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ATF4P18848 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATF4P18848 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATF4P18848 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ATF4P18848 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF4P18848 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF4P18848 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF4P18848 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ATF4P18848 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF4P18848 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ATF4P18848 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF4P18848 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ATF4P18848 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
ATF4P18848 MIR219A2-201ENST00000608502 1504 ntBASIC18.59■□□□□ 0.57
ATF4P18848 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF4P18848 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF4P18848 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.59■□□□□ 0.57
ATF4P18848 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF4P18848 AC010501.1-201ENST00000606270 1962 ntBASIC18.59■□□□□ 0.57
ATF4P18848 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
ATF4P18848 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF4P18848 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC18.59■□□□□ 0.57
ATF4P18848 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF4P18848 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF4P18848 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF4P18848 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATF4P18848 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.59■□□□□ 0.57
ATF4P18848 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATF4P18848 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATF4P18848 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.58■□□□□ 0.57
ATF4P18848 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATF4P18848 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATF4P18848 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATF4P18848 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATF4P18848 AC148477.6-201ENST00000623746 465 ntBASIC18.58■□□□□ 0.56
ATF4P18848 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATF4P18848 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATF4P18848 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATF4P18848 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.57■□□□□ 0.56
ATF4P18848 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATF4P18848 GUSBP5-202ENST00000510805 1989 ntBASIC18.57■□□□□ 0.56
ATF4P18848 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATF4P18848 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATF4P18848 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATF4P18848 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ATF4P18848 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.57■□□□□ 0.56
ATF4P18848 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.57■□□□□ 0.56
ATF4P18848 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATF4P18848 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC18.57■□□□□ 0.56
ATF4P18848 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ATF4P18848 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATF4P18848 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ATF4P18848 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ATF4P18848 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATF4P18848 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.57■□□□□ 0.56
ATF4P18848 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATF4P18848 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
ATF4P18848 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATF4P18848 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATF4P18848 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.56■□□□□ 0.56
ATF4P18848 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ATF4P18848 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATF4P18848 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATF4P18848 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATF4P18848 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATF4P18848 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms