Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRKCAP17252 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRKCAP17252 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PRKCAP17252 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRKCAP17252 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRKCAP17252 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRKCAP17252 MTDHP2-201ENST00000601468 714 ntBASIC20.69■□□□□ 0.9
PRKCAP17252 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRKCAP17252 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRKCAP17252 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRKCAP17252 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRKCAP17252 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRKCAP17252 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.68■□□□□ 0.9
PRKCAP17252 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.68■□□□□ 0.9
PRKCAP17252 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRKCAP17252 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
PRKCAP17252 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.68■□□□□ 0.9
PRKCAP17252 UNC93B8-201ENST00000511903 705 ntBASIC20.68■□□□□ 0.9
PRKCAP17252 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.68■□□□□ 0.9
PRKCAP17252 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRKCAP17252 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRKCAP17252 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PRKCAP17252 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.68■□□□□ 0.9
PRKCAP17252 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.68■□□□□ 0.9
PRKCAP17252 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRKCAP17252 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRKCAP17252 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.68■□□□□ 0.9
PRKCAP17252 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PRKCAP17252 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRKCAP17252 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.67■□□□□ 0.9
PRKCAP17252 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRKCAP17252 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRKCAP17252 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.67■□□□□ 0.9
PRKCAP17252 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.67■□□□□ 0.9
PRKCAP17252 AC010997.5-201ENST00000609182 354 ntBASIC20.67■□□□□ 0.9
PRKCAP17252 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRKCAP17252 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRKCAP17252 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRKCAP17252 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PRKCAP17252 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRKCAP17252 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRKCAP17252 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRKCAP17252 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRKCAP17252 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PRKCAP17252 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRKCAP17252 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRKCAP17252 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.66■□□□□ 0.9
PRKCAP17252 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.66■□□□□ 0.9
PRKCAP17252 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRKCAP17252 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRKCAP17252 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRKCAP17252 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PRKCAP17252 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PRKCAP17252 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRKCAP17252 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRKCAP17252 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRKCAP17252 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.65■□□□□ 0.9
PRKCAP17252 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.65■□□□□ 0.9
PRKCAP17252 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRKCAP17252 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRKCAP17252 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.65■□□□□ 0.9
PRKCAP17252 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRKCAP17252 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRKCAP17252 SLC25A24-204ENST00000569674 2357 ntBASIC20.64■□□□□ 0.89
PRKCAP17252 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
PRKCAP17252 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRKCAP17252 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRKCAP17252 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.64■□□□□ 0.89
PRKCAP17252 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.64■□□□□ 0.89
PRKCAP17252 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.64■□□□□ 0.89
PRKCAP17252 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.64■□□□□ 0.89
PRKCAP17252 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.64■□□□□ 0.89
PRKCAP17252 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PRKCAP17252 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRKCAP17252 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRKCAP17252 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.64■□□□□ 0.89
PRKCAP17252 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRKCAP17252 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PRKCAP17252 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRKCAP17252 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRKCAP17252 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PRKCAP17252 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRKCAP17252 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRKCAP17252 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRKCAP17252 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRKCAP17252 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRKCAP17252 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRKCAP17252 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.62■□□□□ 0.89
PRKCAP17252 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.62■□□□□ 0.89
PRKCAP17252 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
PRKCAP17252 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.62■□□□□ 0.89
PRKCAP17252 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRKCAP17252 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRKCAP17252 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
PRKCAP17252 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.62■□□□□ 0.89
PRKCAP17252 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PRKCAP17252 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PRKCAP17252 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRKCAP17252 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRKCAP17252 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms