Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.74■□□□□ 0.91
NID1P14543 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.74■□□□□ 0.91
NID1P14543 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.74■□□□□ 0.91
NID1P14543 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NID1P14543 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.74■□□□□ 0.91
NID1P14543 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NID1P14543 AC079630.1-202ENST00000618127 1840 ntBASIC20.74■□□□□ 0.91
NID1P14543 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NID1P14543 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NID1P14543 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.73■□□□□ 0.91
NID1P14543 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NID1P14543 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
NID1P14543 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NID1P14543 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NID1P14543 MIR4787-201ENST00000607364 84 ntBASIC20.73■□□□□ 0.91
NID1P14543 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NID1P14543 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NID1P14543 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NID1P14543 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NID1P14543 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NID1P14543 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NID1P14543 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.72■□□□□ 0.91
NID1P14543 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NID1P14543 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NID1P14543 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NID1P14543 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
NID1P14543 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NID1P14543 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.72■□□□□ 0.91
NID1P14543 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.72■□□□□ 0.91
NID1P14543 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NID1P14543 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.72■□□□□ 0.91
NID1P14543 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NID1P14543 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NID1P14543 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NID1P14543 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NID1P14543 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NID1P14543 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NID1P14543 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NID1P14543 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NID1P14543 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NID1P14543 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.71■□□□□ 0.91
NID1P14543 KRT125P-201ENST00000546827 989 ntBASIC20.71■□□□□ 0.91
NID1P14543 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NID1P14543 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NID1P14543 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NID1P14543 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
NID1P14543 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NID1P14543 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.7■□□□□ 0.9
NID1P14543 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NID1P14543 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
NID1P14543 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NID1P14543 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NID1P14543 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NID1P14543 AC092028.1-203ENST00000608262 953 ntBASIC20.7■□□□□ 0.9
NID1P14543 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
NID1P14543 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.7■□□□□ 0.9
NID1P14543 AC005703.6-201ENST00000623265 1329 ntBASIC20.7■□□□□ 0.9
NID1P14543 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NID1P14543 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NID1P14543 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NID1P14543 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NID1P14543 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NID1P14543 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
NID1P14543 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NID1P14543 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
NID1P14543 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NID1P14543 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.69■□□□□ 0.9
NID1P14543 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.69■□□□□ 0.9
NID1P14543 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.69■□□□□ 0.9
NID1P14543 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.69■□□□□ 0.9
NID1P14543 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.69■□□□□ 0.9
NID1P14543 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NID1P14543 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
NID1P14543 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NID1P14543 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NID1P14543 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.69■□□□□ 0.9
NID1P14543 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.69■□□□□ 0.9
NID1P14543 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NID1P14543 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NID1P14543 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.68■□□□□ 0.9
NID1P14543 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
NID1P14543 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.68■□□□□ 0.9
NID1P14543 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.68■□□□□ 0.9
NID1P14543 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.68■□□□□ 0.9
NID1P14543 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.68■□□□□ 0.9
NID1P14543 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NID1P14543 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
NID1P14543 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NID1P14543 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NID1P14543 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NID1P14543 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NID1P14543 UNC93B8-201ENST00000511903 705 ntBASIC20.67■□□□□ 0.9
NID1P14543 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NID1P14543 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.67■□□□□ 0.9
NID1P14543 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NID1P14543 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NID1P14543 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
NID1P14543 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.66■□□□□ 0.9
NID1P14543 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.66■□□□□ 0.9
NID1P14543 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms