Protein–RNA interactions for Protein: P11279

LAMP1, Lysosome-associated membrane glycoprotein 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1P11279 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.33■■□□□ 1.01
LAMP1P11279 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.33■■□□□ 1.01
LAMP1P11279 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.33■■□□□ 1.01
LAMP1P11279 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.33■■□□□ 1.01
LAMP1P11279 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.33■■□□□ 1.01
LAMP1P11279 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LAMP1P11279 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.33■■□□□ 1
LAMP1P11279 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LAMP1P11279 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LAMP1P11279 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LAMP1P11279 AC079834.2-201ENST00000609776 1949 ntBASIC21.32■■□□□ 1
LAMP1P11279 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.32■■□□□ 1
LAMP1P11279 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.32■■□□□ 1
LAMP1P11279 AC137630.3-201ENST00000607245 391 ntBASIC21.32■■□□□ 1
LAMP1P11279 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LAMP1P11279 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.32■■□□□ 1
LAMP1P11279 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
LAMP1P11279 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LAMP1P11279 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.31■■□□□ 1
LAMP1P11279 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.31■■□□□ 1
LAMP1P11279 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.31■■□□□ 1
LAMP1P11279 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.31■■□□□ 1
LAMP1P11279 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
LAMP1P11279 AL031848.2-201ENST00000607670 837 ntBASIC21.31■■□□□ 1
LAMP1P11279 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.31■■□□□ 1
LAMP1P11279 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LAMP1P11279 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LAMP1P11279 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.31■■□□□ 1
LAMP1P11279 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.3■■□□□ 1
LAMP1P11279 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.3■■□□□ 1
LAMP1P11279 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
LAMP1P11279 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LAMP1P11279 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.3■■□□□ 1
LAMP1P11279 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
LAMP1P11279 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
LAMP1P11279 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LAMP1P11279 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LAMP1P11279 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LAMP1P11279 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
LAMP1P11279 AL117328.2-201ENST00000624617 1940 ntBASIC21.29■■□□□ 1
LAMP1P11279 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.29■■□□□ 1
LAMP1P11279 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LAMP1P11279 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
LAMP1P11279 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LAMP1P11279 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.29■■□□□ 1
LAMP1P11279 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LAMP1P11279 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.29■■□□□ 1
LAMP1P11279 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.29■■□□□ 1
LAMP1P11279 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.29■■□□□ 1
LAMP1P11279 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.29■■□□□ 1
LAMP1P11279 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.29■■□□□ 1
LAMP1P11279 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.28■■□□□ 1
LAMP1P11279 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
LAMP1P11279 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
LAMP1P11279 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.28■■□□□ 1
LAMP1P11279 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LAMP1P11279 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.28■■□□□ 1
LAMP1P11279 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.28■■□□□ 1
LAMP1P11279 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LAMP1P11279 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.28■■□□□ 1
LAMP1P11279 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.28■■□□□ 1
LAMP1P11279 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.28■■□□□ 1
LAMP1P11279 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.28■■□□□ 1
LAMP1P11279 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
LAMP1P11279 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.28■■□□□ 1
LAMP1P11279 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
LAMP1P11279 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.27■■□□□ 1
LAMP1P11279 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LAMP1P11279 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LAMP1P11279 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
LAMP1P11279 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LAMP1P11279 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LAMP1P11279 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
LAMP1P11279 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LAMP1P11279 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.26■□□□□ 0.99
LAMP1P11279 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LAMP1P11279 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.26■□□□□ 0.99
LAMP1P11279 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LAMP1P11279 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LAMP1P11279 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LAMP1P11279 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LAMP1P11279 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.26■□□□□ 0.99
LAMP1P11279 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LAMP1P11279 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.25■□□□□ 0.99
LAMP1P11279 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LAMP1P11279 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.25■□□□□ 0.99
LAMP1P11279 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMP1P11279 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.25■□□□□ 0.99
LAMP1P11279 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMP1P11279 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMP1P11279 AL353803.4-201ENST00000565882 1934 ntBASIC21.25■□□□□ 0.99
LAMP1P11279 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LAMP1P11279 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMP1P11279 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LAMP1P11279 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LAMP1P11279 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LAMP1P11279 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LAMP1P11279 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.24■□□□□ 0.99
LAMP1P11279 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.24■□□□□ 0.99
LAMP1P11279 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms