Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB40ALP0C0E4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.22■□□□□ 0.99
RAB40ALP0C0E4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB40ALP0C0E4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB40ALP0C0E4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB40ALP0C0E4 AC141586.4-201ENST00000624558 1573 ntBASIC21.22■□□□□ 0.99
RAB40ALP0C0E4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB40ALP0C0E4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB40ALP0C0E4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB40ALP0C0E4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RAB40ALP0C0E4 AC099791.1-201ENST00000416440 715 ntBASIC21.21■□□□□ 0.99
RAB40ALP0C0E4 BX842568.3-201ENST00000418104 571 ntBASIC21.21■□□□□ 0.99
RAB40ALP0C0E4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RAB40ALP0C0E4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.21■□□□□ 0.99
RAB40ALP0C0E4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.21■□□□□ 0.99
RAB40ALP0C0E4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB40ALP0C0E4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.21■□□□□ 0.99
RAB40ALP0C0E4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAB40ALP0C0E4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAB40ALP0C0E4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.2■□□□□ 0.99
RAB40ALP0C0E4 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAB40ALP0C0E4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAB40ALP0C0E4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAB40ALP0C0E4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.2■□□□□ 0.98
RAB40ALP0C0E4 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.2■□□□□ 0.98
RAB40ALP0C0E4 AC233992.3-201ENST00000607491 485 ntBASIC21.2■□□□□ 0.98
RAB40ALP0C0E4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
RAB40ALP0C0E4 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.2■□□□□ 0.98
RAB40ALP0C0E4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAB40ALP0C0E4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAB40ALP0C0E4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.2■□□□□ 0.98
RAB40ALP0C0E4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40ALP0C0E4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40ALP0C0E4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40ALP0C0E4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB40ALP0C0E4 MIR5787-201ENST00000611784 55 ntBASIC21.19■□□□□ 0.98
RAB40ALP0C0E4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40ALP0C0E4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40ALP0C0E4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAB40ALP0C0E4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.19■□□□□ 0.98
RAB40ALP0C0E4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB40ALP0C0E4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB40ALP0C0E4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB40ALP0C0E4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB40ALP0C0E4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB40ALP0C0E4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RAB40ALP0C0E4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RAB40ALP0C0E4 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB40ALP0C0E4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.18■□□□□ 0.98
RAB40ALP0C0E4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAB40ALP0C0E4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB40ALP0C0E4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAB40ALP0C0E4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.18■□□□□ 0.98
RAB40ALP0C0E4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB40ALP0C0E4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB40ALP0C0E4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB40ALP0C0E4 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RAB40ALP0C0E4 pRNA.6-201ENST00000610482 90 ntBASIC21.17■□□□□ 0.98
RAB40ALP0C0E4 pRNA.5-201ENST00000612139 90 ntBASIC21.17■□□□□ 0.98
RAB40ALP0C0E4 pRNA.11-201ENST00000618423 90 ntBASIC21.17■□□□□ 0.98
RAB40ALP0C0E4 pRNA.13-201ENST00000619112 90 ntBASIC21.17■□□□□ 0.98
RAB40ALP0C0E4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RAB40ALP0C0E4 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAB40ALP0C0E4 AC142381.3-201ENST00000568208 1670 ntBASIC21.17■□□□□ 0.98
RAB40ALP0C0E4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.17■□□□□ 0.98
RAB40ALP0C0E4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAB40ALP0C0E4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB40ALP0C0E4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB40ALP0C0E4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB40ALP0C0E4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.16■□□□□ 0.98
RAB40ALP0C0E4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB40ALP0C0E4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RAB40ALP0C0E4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.16■□□□□ 0.98
RAB40ALP0C0E4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RAB40ALP0C0E4 IRS3P-201ENST00000223076 1006 ntBASIC21.16■□□□□ 0.98
RAB40ALP0C0E4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.16■□□□□ 0.98
RAB40ALP0C0E4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.16■□□□□ 0.98
RAB40ALP0C0E4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.16■□□□□ 0.98
RAB40ALP0C0E4 MIR6821-201ENST00000617625 74 ntBASIC21.16■□□□□ 0.98
RAB40ALP0C0E4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RAB40ALP0C0E4 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAB40ALP0C0E4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAB40ALP0C0E4 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB40ALP0C0E4 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB40ALP0C0E4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RAB40ALP0C0E4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.15■□□□□ 0.98
RAB40ALP0C0E4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RAB40ALP0C0E4 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.15■□□□□ 0.98
RAB40ALP0C0E4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.15■□□□□ 0.98
RAB40ALP0C0E4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB40ALP0C0E4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.14■□□□□ 0.98
RAB40ALP0C0E4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB40ALP0C0E4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RAB40ALP0C0E4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
RAB40ALP0C0E4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.14■□□□□ 0.98
RAB40ALP0C0E4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RAB40ALP0C0E4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB40ALP0C0E4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.14■□□□□ 0.97
RAB40ALP0C0E4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RAB40ALP0C0E4 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms