Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CSF1P09603 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.36■□□□□ 0.69
CSF1P09603 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1P09603 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CSF1P09603 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1P09603 AC007375.3-201ENST00000600936 2314 ntBASIC19.35■□□□□ 0.69
CSF1P09603 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.35■□□□□ 0.69
CSF1P09603 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CSF1P09603 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1P09603 AL024507.2-201ENST00000606070 2574 ntBASIC19.35■□□□□ 0.69
CSF1P09603 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1P09603 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.35■□□□□ 0.69
CSF1P09603 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1P09603 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CSF1P09603 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CSF1P09603 AL161729.1-201ENST00000604104 1402 ntBASIC19.34■□□□□ 0.69
CSF1P09603 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1P09603 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1P09603 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1P09603 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1P09603 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.34■□□□□ 0.69
CSF1P09603 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1P09603 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1P09603 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1P09603 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CSF1P09603 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CSF1P09603 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CSF1P09603 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CSF1P09603 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CSF1P09603 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.33■□□□□ 0.69
CSF1P09603 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CSF1P09603 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CSF1P09603 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CSF1P09603 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CSF1P09603 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.68
CSF1P09603 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CSF1P09603 BHLHE23-202ENST00000612929 1109 ntBASIC19.33■□□□□ 0.68
CSF1P09603 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CSF1P09603 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CSF1P09603 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.33■□□□□ 0.68
CSF1P09603 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CSF1P09603 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CSF1P09603 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CSF1P09603 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.33■□□□□ 0.68
CSF1P09603 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CSF1P09603 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.32■□□□□ 0.68
CSF1P09603 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CSF1P09603 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CSF1P09603 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.32■□□□□ 0.68
CSF1P09603 KRT18P10-201ENST00000388836 1287 ntBASIC19.32■□□□□ 0.68
CSF1P09603 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.32■□□□□ 0.68
CSF1P09603 ESRRAP2-201ENST00000418437 1549 ntBASIC19.31■□□□□ 0.68
CSF1P09603 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CSF1P09603 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSF1P09603 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.31■□□□□ 0.68
CSF1P09603 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CSF1P09603 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CSF1P09603 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSF1P09603 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSF1P09603 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CSF1P09603 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.31■□□□□ 0.68
CSF1P09603 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CSF1P09603 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CSF1P09603 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.31■□□□□ 0.68
CSF1P09603 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.31■□□□□ 0.68
CSF1P09603 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.31■□□□□ 0.68
CSF1P09603 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
CSF1P09603 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CSF1P09603 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSF1P09603 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.3■□□□□ 0.68
CSF1P09603 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CSF1P09603 AL035685.1-201ENST00000636663 812 ntBASIC19.3■□□□□ 0.68
CSF1P09603 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CSF1P09603 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CSF1P09603 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.29■□□□□ 0.68
CSF1P09603 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1P09603 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1P09603 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.29■□□□□ 0.68
CSF1P09603 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CSF1P09603 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1P09603 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1P09603 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1P09603 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1P09603 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1P09603 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.29■□□□□ 0.68
CSF1P09603 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CSF1P09603 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CSF1P09603 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CSF1P09603 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
CSF1P09603 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.28■□□□□ 0.68
CSF1P09603 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.28■□□□□ 0.68
CSF1P09603 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSF1P09603 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.28■□□□□ 0.68
CSF1P09603 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CSF1P09603 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSF1P09603 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.28■□□□□ 0.68
CSF1P09603 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.28■□□□□ 0.68
CSF1P09603 AC026202.3-201ENST00000600805 1127 ntBASIC19.28■□□□□ 0.68
CSF1P09603 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CSF1P09603 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms