Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.11■□□□□ 0.97
CLPTM1O96005 SMPD5-203ENST00000639008 1464 ntBASIC21.11■□□□□ 0.97
CLPTM1O96005 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CLPTM1O96005 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CLPTM1O96005 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLPTM1O96005 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.1■□□□□ 0.97
CLPTM1O96005 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLPTM1O96005 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLPTM1O96005 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.1■□□□□ 0.97
CLPTM1O96005 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLPTM1O96005 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
CLPTM1O96005 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CLPTM1O96005 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLPTM1O96005 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLPTM1O96005 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CLPTM1O96005 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
CLPTM1O96005 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CLPTM1O96005 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.09■□□□□ 0.97
CLPTM1O96005 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLPTM1O96005 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CLPTM1O96005 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.09■□□□□ 0.97
CLPTM1O96005 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.09■□□□□ 0.97
CLPTM1O96005 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLPTM1O96005 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.09■□□□□ 0.97
CLPTM1O96005 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLPTM1O96005 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLPTM1O96005 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLPTM1O96005 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.08■□□□□ 0.97
CLPTM1O96005 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.08■□□□□ 0.97
CLPTM1O96005 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLPTM1O96005 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLPTM1O96005 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLPTM1O96005 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLPTM1O96005 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.08■□□□□ 0.96
CLPTM1O96005 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
CLPTM1O96005 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CLPTM1O96005 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.07■□□□□ 0.96
CLPTM1O96005 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLPTM1O96005 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLPTM1O96005 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLPTM1O96005 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.07■□□□□ 0.96
CLPTM1O96005 AC025884.2-201ENST00000553429 711 ntBASIC21.07■□□□□ 0.96
CLPTM1O96005 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CLPTM1O96005 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLPTM1O96005 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLPTM1O96005 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.06■□□□□ 0.96
CLPTM1O96005 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CLPTM1O96005 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLPTM1O96005 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLPTM1O96005 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CLPTM1O96005 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.06■□□□□ 0.96
CLPTM1O96005 ABHD17AP5-201ENST00000580133 923 ntBASIC21.06■□□□□ 0.96
CLPTM1O96005 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLPTM1O96005 AC092667.1-201ENST00000434301 2586 ntBASIC21.06■□□□□ 0.96
CLPTM1O96005 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CLPTM1O96005 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLPTM1O96005 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CLPTM1O96005 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLPTM1O96005 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.05■□□□□ 0.96
CLPTM1O96005 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CLPTM1O96005 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.05■□□□□ 0.96
CLPTM1O96005 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLPTM1O96005 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLPTM1O96005 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.05■□□□□ 0.96
CLPTM1O96005 AC007029.1-201ENST00000604183 313 ntBASIC21.05■□□□□ 0.96
CLPTM1O96005 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLPTM1O96005 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLPTM1O96005 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLPTM1O96005 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CLPTM1O96005 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.05■□□□□ 0.96
CLPTM1O96005 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CLPTM1O96005 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CLPTM1O96005 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CLPTM1O96005 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CLPTM1O96005 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLPTM1O96005 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CLPTM1O96005 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.04■□□□□ 0.96
CLPTM1O96005 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.04■□□□□ 0.96
CLPTM1O96005 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CLPTM1O96005 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.04■□□□□ 0.96
CLPTM1O96005 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLPTM1O96005 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLPTM1O96005 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLPTM1O96005 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLPTM1O96005 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.03■□□□□ 0.96
CLPTM1O96005 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
CLPTM1O96005 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLPTM1O96005 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLPTM1O96005 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CLPTM1O96005 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLPTM1O96005 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CLPTM1O96005 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLPTM1O96005 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CLPTM1O96005 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.02■□□□□ 0.96
CLPTM1O96005 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
CLPTM1O96005 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLPTM1O96005 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CLPTM1O96005 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLPTM1O96005 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CLPTM1O96005 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms