Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
SIX6O95475 ESRRAP2-201ENST00000418437 1549 ntBASIC18.8■□□□□ 0.6
SIX6O95475 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SIX6O95475 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIX6O95475 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIX6O95475 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIX6O95475 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIX6O95475 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIX6O95475 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIX6O95475 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIX6O95475 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIX6O95475 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIX6O95475 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SIX6O95475 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.79■□□□□ 0.6
SIX6O95475 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIX6O95475 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIX6O95475 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIX6O95475 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIX6O95475 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SIX6O95475 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.79■□□□□ 0.6
SIX6O95475 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
SIX6O95475 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SIX6O95475 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIX6O95475 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIX6O95475 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SIX6O95475 AC026310.3-201ENST00000625186 2373 ntBASIC18.78■□□□□ 0.6
SIX6O95475 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIX6O95475 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIX6O95475 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.78■□□□□ 0.6
SIX6O95475 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SIX6O95475 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIX6O95475 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.78■□□□□ 0.6
SIX6O95475 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.78■□□□□ 0.6
SIX6O95475 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIX6O95475 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIX6O95475 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIX6O95475 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIX6O95475 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIX6O95475 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIX6O95475 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.77■□□□□ 0.6
SIX6O95475 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIX6O95475 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIX6O95475 DUX4L29-201ENST00000425409 679 ntBASIC18.77■□□□□ 0.6
SIX6O95475 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIX6O95475 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIX6O95475 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
SIX6O95475 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIX6O95475 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIX6O95475 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SIX6O95475 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SIX6O95475 AC139530.1-201ENST00000575312 1977 ntBASIC18.77■□□□□ 0.59
SIX6O95475 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SIX6O95475 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SIX6O95475 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SIX6O95475 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIX6O95475 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX6O95475 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX6O95475 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIX6O95475 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.76■□□□□ 0.59
SIX6O95475 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX6O95475 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIX6O95475 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SIX6O95475 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.76■□□□□ 0.59
SIX6O95475 AC092667.1-201ENST00000434301 2586 ntBASIC18.76■□□□□ 0.59
SIX6O95475 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIX6O95475 BOD1-206ENST00000480951 814 ntTSL 2 BASIC18.76■□□□□ 0.59
SIX6O95475 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.76■□□□□ 0.59
SIX6O95475 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SIX6O95475 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SIX6O95475 AC092053.2-201ENST00000640557 1818 ntBASIC18.76■□□□□ 0.59
SIX6O95475 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SIX6O95475 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.75■□□□□ 0.59
SIX6O95475 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.75■□□□□ 0.59
SIX6O95475 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.75■□□□□ 0.59
SIX6O95475 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SIX6O95475 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.75■□□□□ 0.59
SIX6O95475 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SIX6O95475 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX6O95475 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SIX6O95475 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.75■□□□□ 0.59
SIX6O95475 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.75■□□□□ 0.59
SIX6O95475 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SIX6O95475 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIX6O95475 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIX6O95475 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.74■□□□□ 0.59
SIX6O95475 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIX6O95475 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.74■□□□□ 0.59
SIX6O95475 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.74■□□□□ 0.59
SIX6O95475 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIX6O95475 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SIX6O95475 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.74■□□□□ 0.59
SIX6O95475 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIX6O95475 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIX6O95475 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
SIX6O95475 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX6O95475 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX6O95475 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.73■□□□□ 0.59
SIX6O95475 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX6O95475 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SIX6O95475 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms