Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
RFPL1O75677 LINC00565-201ENST00000562710 2331 ntBASIC22.6■■□□□ 1.21
RFPL1O75677 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RFPL1O75677 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.6■■□□□ 1.21
RFPL1O75677 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RFPL1O75677 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RFPL1O75677 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RFPL1O75677 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RFPL1O75677 GUSBP5-202ENST00000510805 1989 ntBASIC22.59■■□□□ 1.21
RFPL1O75677 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RFPL1O75677 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RFPL1O75677 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RFPL1O75677 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RFPL1O75677 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.59■■□□□ 1.21
RFPL1O75677 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RFPL1O75677 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC22.59■■□□□ 1.21
RFPL1O75677 AC011551.1-201ENST00000614101 683 ntBASIC22.59■■□□□ 1.21
RFPL1O75677 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RFPL1O75677 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.59■■□□□ 1.21
RFPL1O75677 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
RFPL1O75677 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
RFPL1O75677 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
RFPL1O75677 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RFPL1O75677 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
RFPL1O75677 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RFPL1O75677 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
RFPL1O75677 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.58■■□□□ 1.21
RFPL1O75677 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RFPL1O75677 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RFPL1O75677 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RFPL1O75677 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.58■■□□□ 1.21
RFPL1O75677 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.58■■□□□ 1.21
RFPL1O75677 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RFPL1O75677 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.2
RFPL1O75677 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFPL1O75677 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFPL1O75677 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RFPL1O75677 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
RFPL1O75677 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.57■■□□□ 1.2
RFPL1O75677 AC239859.2-201ENST00000444165 318 ntBASIC22.57■■□□□ 1.2
RFPL1O75677 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.57■■□□□ 1.2
RFPL1O75677 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFPL1O75677 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.57■■□□□ 1.2
RFPL1O75677 LINC00526-201ENST00000581067 1875 ntBASIC22.57■■□□□ 1.2
RFPL1O75677 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFPL1O75677 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.57■■□□□ 1.2
RFPL1O75677 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFPL1O75677 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFPL1O75677 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
RFPL1O75677 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.57■■□□□ 1.2
RFPL1O75677 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RFPL1O75677 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RFPL1O75677 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RFPL1O75677 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RFPL1O75677 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RFPL1O75677 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RFPL1O75677 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RFPL1O75677 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RFPL1O75677 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RFPL1O75677 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.55■■□□□ 1.2
RFPL1O75677 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFPL1O75677 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFPL1O75677 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.55■■□□□ 1.2
RFPL1O75677 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFPL1O75677 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFPL1O75677 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.55■■□□□ 1.2
RFPL1O75677 Z92544.1-202ENST00000571933 1220 ntBASIC22.55■■□□□ 1.2
RFPL1O75677 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.55■■□□□ 1.2
RFPL1O75677 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC22.55■■□□□ 1.2
RFPL1O75677 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.55■■□□□ 1.2
RFPL1O75677 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFPL1O75677 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
RFPL1O75677 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.55■■□□□ 1.2
RFPL1O75677 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFPL1O75677 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RFPL1O75677 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFPL1O75677 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RFPL1O75677 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.54■■□□□ 1.2
RFPL1O75677 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RFPL1O75677 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.54■■□□□ 1.2
RFPL1O75677 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.54■■□□□ 1.2
RFPL1O75677 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.54■■□□□ 1.2
RFPL1O75677 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFPL1O75677 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFPL1O75677 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RFPL1O75677 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RFPL1O75677 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RFPL1O75677 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RFPL1O75677 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RFPL1O75677 ECEL1P1-201ENST00000373592 1742 ntBASIC22.53■■□□□ 1.2
RFPL1O75677 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RFPL1O75677 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.53■■□□□ 1.2
RFPL1O75677 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
RFPL1O75677 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RFPL1O75677 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
RFPL1O75677 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RFPL1O75677 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RFPL1O75677 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RFPL1O75677 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
RFPL1O75677 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms