Protein–RNA interactions for Protein: O60906

SMPD2, Sphingomyelin phosphodiesterase 2, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD2O60906 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD2O60906 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD2O60906 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.65■□□□□ 0.74
SMPD2O60906 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD2O60906 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD2O60906 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD2O60906 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.65■□□□□ 0.74
SMPD2O60906 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.65■□□□□ 0.74
SMPD2O60906 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.65■□□□□ 0.74
SMPD2O60906 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.65■□□□□ 0.74
SMPD2O60906 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD2O60906 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD2O60906 SYT6-210ENST00000641643 1587 ntBASIC19.65■□□□□ 0.74
SMPD2O60906 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD2O60906 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SMPD2O60906 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMPD2O60906 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.64■□□□□ 0.73
SMPD2O60906 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMPD2O60906 MIR939-201ENST00000401314 82 ntBASIC19.64■□□□□ 0.73
SMPD2O60906 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.64■□□□□ 0.73
SMPD2O60906 AC091305.1-201ENST00000479476 895 ntBASIC19.64■□□□□ 0.73
SMPD2O60906 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SMPD2O60906 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMPD2O60906 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.64■□□□□ 0.73
SMPD2O60906 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMPD2O60906 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD2O60906 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD2O60906 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD2O60906 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.63■□□□□ 0.73
SMPD2O60906 AP001330.3-201ENST00000520123 633 ntBASIC19.63■□□□□ 0.73
SMPD2O60906 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD2O60906 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD2O60906 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.63■□□□□ 0.73
SMPD2O60906 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SMPD2O60906 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMPD2O60906 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD2O60906 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD2O60906 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD2O60906 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD2O60906 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD2O60906 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SMPD2O60906 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
SMPD2O60906 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.62■□□□□ 0.73
SMPD2O60906 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.62■□□□□ 0.73
SMPD2O60906 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.62■□□□□ 0.73
SMPD2O60906 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD2O60906 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD2O60906 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.62■□□□□ 0.73
SMPD2O60906 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMPD2O60906 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.61■□□□□ 0.73
SMPD2O60906 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
SMPD2O60906 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
SMPD2O60906 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMPD2O60906 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMPD2O60906 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMPD2O60906 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMPD2O60906 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.61■□□□□ 0.73
SMPD2O60906 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.61■□□□□ 0.73
SMPD2O60906 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.61■□□□□ 0.73
SMPD2O60906 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMPD2O60906 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMPD2O60906 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMPD2O60906 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
SMPD2O60906 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.61■□□□□ 0.73
SMPD2O60906 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SMPD2O60906 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMPD2O60906 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMPD2O60906 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMPD2O60906 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMPD2O60906 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMPD2O60906 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMPD2O60906 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.6■□□□□ 0.73
SMPD2O60906 MIR6821-201ENST00000617625 74 ntBASIC19.6■□□□□ 0.73
SMPD2O60906 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMPD2O60906 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SMPD2O60906 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.6■□□□□ 0.73
SMPD2O60906 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SMPD2O60906 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMPD2O60906 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.59■□□□□ 0.73
SMPD2O60906 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.59■□□□□ 0.73
SMPD2O60906 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMPD2O60906 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMPD2O60906 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.59■□□□□ 0.73
SMPD2O60906 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SMPD2O60906 MIR4767-201ENST00000582827 78 ntBASIC19.59■□□□□ 0.73
SMPD2O60906 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.59■□□□□ 0.73
SMPD2O60906 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SMPD2O60906 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMPD2O60906 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.59■□□□□ 0.73
SMPD2O60906 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMPD2O60906 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.58■□□□□ 0.73
SMPD2O60906 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SMPD2O60906 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMPD2O60906 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMPD2O60906 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.58■□□□□ 0.72
SMPD2O60906 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.58■□□□□ 0.72
SMPD2O60906 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMPD2O60906 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMPD2O60906 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMPD2O60906 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms