Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC15.99■□□□□ 0.15
PAX4O43316 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PAX4O43316 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC15.99■□□□□ 0.15
PAX4O43316 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PAX4O43316 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PAX4O43316 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PAX4O43316 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PAX4O43316 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PAX4O43316 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PAX4O43316 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PAX4O43316 EI24-204ENST00000527235 1625 ntTSL 5 BASIC15.98■□□□□ 0.15
PAX4O43316 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PAX4O43316 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PAX4O43316 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PAX4O43316 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PAX4O43316 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.98■□□□□ 0.15
PAX4O43316 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PAX4O43316 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
PAX4O43316 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PAX4O43316 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PAX4O43316 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PAX4O43316 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PAX4O43316 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PAX4O43316 AC005703.6-201ENST00000623265 1329 ntBASIC15.97■□□□□ 0.15
PAX4O43316 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PAX4O43316 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC15.97■□□□□ 0.15
PAX4O43316 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PAX4O43316 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.97■□□□□ 0.15
PAX4O43316 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PAX4O43316 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PAX4O43316 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PAX4O43316 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PAX4O43316 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PAX4O43316 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC15.97■□□□□ 0.15
PAX4O43316 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PAX4O43316 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC15.97■□□□□ 0.15
PAX4O43316 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PAX4O43316 EI24-213ENST00000618552 1747 ntTSL 5 BASIC15.97■□□□□ 0.15
PAX4O43316 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PAX4O43316 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.96■□□□□ 0.15
PAX4O43316 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PAX4O43316 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PAX4O43316 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.96■□□□□ 0.15
PAX4O43316 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.96■□□□□ 0.15
PAX4O43316 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.96■□□□□ 0.15
PAX4O43316 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
PAX4O43316 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PAX4O43316 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.96■□□□□ 0.15
PAX4O43316 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PAX4O43316 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PAX4O43316 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC15.95■□□□□ 0.14
PAX4O43316 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAX4O43316 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAX4O43316 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAX4O43316 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PAX4O43316 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PAX4O43316 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PAX4O43316 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.95■□□□□ 0.14
PAX4O43316 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.95■□□□□ 0.14
PAX4O43316 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PAX4O43316 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PAX4O43316 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.95■□□□□ 0.14
PAX4O43316 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.95■□□□□ 0.14
PAX4O43316 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PAX4O43316 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAX4O43316 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAX4O43316 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PAX4O43316 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.95■□□□□ 0.14
PAX4O43316 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAX4O43316 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PAX4O43316 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC15.95■□□□□ 0.14
PAX4O43316 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PAX4O43316 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PAX4O43316 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PAX4O43316 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
PAX4O43316 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
PAX4O43316 GUSBP5-201ENST00000418136 578 ntBASIC15.94■□□□□ 0.14
PAX4O43316 KRT16P3-201ENST00000439127 1283 ntBASIC15.94■□□□□ 0.14
PAX4O43316 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PAX4O43316 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC15.94■□□□□ 0.14
PAX4O43316 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC15.94■□□□□ 0.14
PAX4O43316 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PAX4O43316 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PAX4O43316 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC15.94■□□□□ 0.14
PAX4O43316 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PAX4O43316 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PAX4O43316 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PAX4O43316 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PAX4O43316 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PAX4O43316 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PAX4O43316 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PAX4O43316 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.93■□□□□ 0.14
PAX4O43316 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.93■□□□□ 0.14
PAX4O43316 UNC93B8-201ENST00000511903 705 ntBASIC15.93■□□□□ 0.14
PAX4O43316 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PAX4O43316 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PAX4O43316 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PAX4O43316 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PAX4O43316 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC15.93■□□□□ 0.14
PAX4O43316 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms