Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC25.11■■□□□ 1.61
TNRC18O15417 AC091060.1-201ENST00000623524 1766 ntBASIC25.11■■□□□ 1.61
TNRC18O15417 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
TNRC18O15417 GXYLT1P3-201ENST00000453058 1193 ntBASIC25.11■■□□□ 1.61
TNRC18O15417 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TNRC18O15417 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.11■■□□□ 1.61
TNRC18O15417 LHPP-203ENST00000392757 840 ntTSL 3 BASIC25.11■■□□□ 1.61
TNRC18O15417 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
TNRC18O15417 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.11■■□□□ 1.61
TNRC18O15417 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TNRC18O15417 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
TNRC18O15417 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TNRC18O15417 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC25.1■■□□□ 1.61
TNRC18O15417 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TNRC18O15417 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
TNRC18O15417 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.1■■□□□ 1.61
TNRC18O15417 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TNRC18O15417 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC25.1■■□□□ 1.61
TNRC18O15417 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC25.1■■□□□ 1.61
TNRC18O15417 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.1■■□□□ 1.61
TNRC18O15417 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TNRC18O15417 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.1■■□□□ 1.61
TNRC18O15417 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC25.09■■□□□ 1.61
TNRC18O15417 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TNRC18O15417 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TNRC18O15417 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
TNRC18O15417 KRT19P1-201ENST00000405746 1186 ntBASIC25.09■■□□□ 1.61
TNRC18O15417 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
TNRC18O15417 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
TNRC18O15417 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
TNRC18O15417 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
TNRC18O15417 AL158047.1-201ENST00000445918 881 ntBASIC25.08■■□□□ 1.6
TNRC18O15417 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
TNRC18O15417 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC25.08■■□□□ 1.6
TNRC18O15417 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
TNRC18O15417 AC009086.3-201ENST00000623486 1008 ntBASIC25.08■■□□□ 1.6
TNRC18O15417 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
TNRC18O15417 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TNRC18O15417 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TNRC18O15417 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TNRC18O15417 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TNRC18O15417 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TNRC18O15417 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.07■■□□□ 1.6
TNRC18O15417 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
TNRC18O15417 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
TNRC18O15417 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
TNRC18O15417 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC25.06■■□□□ 1.6
TNRC18O15417 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TNRC18O15417 USP36-216ENST00000589424 970 ntTSL 5 BASIC25.06■■□□□ 1.6
TNRC18O15417 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC25.06■■□□□ 1.6
TNRC18O15417 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.06■■□□□ 1.6
TNRC18O15417 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
TNRC18O15417 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.06■■□□□ 1.6
TNRC18O15417 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.06■■□□□ 1.6
TNRC18O15417 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
TNRC18O15417 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC25.05■■□□□ 1.6
TNRC18O15417 KRT18P11-201ENST00000435214 1283 ntBASIC25.05■■□□□ 1.6
TNRC18O15417 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC25.05■■□□□ 1.6
TNRC18O15417 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC25.05■■□□□ 1.6
TNRC18O15417 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TNRC18O15417 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TNRC18O15417 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TNRC18O15417 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.05■■□□□ 1.6
TNRC18O15417 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TNRC18O15417 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
TNRC18O15417 AC131274.2-201ENST00000580697 1507 ntBASIC25.05■■□□□ 1.6
TNRC18O15417 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC25.05■■□□□ 1.6
TNRC18O15417 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
TNRC18O15417 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
TNRC18O15417 UNC93B4-201ENST00000505679 747 ntBASIC25.05■■□□□ 1.6
TNRC18O15417 pRNA.6-201ENST00000610482 90 ntBASIC25.05■■□□□ 1.6
TNRC18O15417 pRNA.5-201ENST00000612139 90 ntBASIC25.05■■□□□ 1.6
TNRC18O15417 pRNA.11-201ENST00000618423 90 ntBASIC25.05■■□□□ 1.6
TNRC18O15417 pRNA.13-201ENST00000619112 90 ntBASIC25.05■■□□□ 1.6
TNRC18O15417 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
TNRC18O15417 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.04■■□□□ 1.6
TNRC18O15417 BAALC-201ENST00000297574 801 ntTSL 3 BASIC25.04■■□□□ 1.6
TNRC18O15417 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TNRC18O15417 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
TNRC18O15417 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.04■■□□□ 1.6
TNRC18O15417 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TNRC18O15417 RNA5SP413-201ENST00000516373 109 ntBASIC25.04■■□□□ 1.6
TNRC18O15417 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC25.04■■□□□ 1.6
TNRC18O15417 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TNRC18O15417 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TNRC18O15417 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
TNRC18O15417 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.04■■□□□ 1.6
TNRC18O15417 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
TNRC18O15417 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TNRC18O15417 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
TNRC18O15417 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TNRC18O15417 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.03■■□□□ 1.6
TNRC18O15417 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC25.03■■□□□ 1.6
TNRC18O15417 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.03■■□□□ 1.6
TNRC18O15417 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC25.03■■□□□ 1.6
TNRC18O15417 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC25.03■■□□□ 1.6
TNRC18O15417 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
TNRC18O15417 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TNRC18O15417 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
TNRC18O15417 AL445228.2-201ENST00000605589 952 ntBASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms