Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
ATP2A1O14983 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ATP2A1O14983 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.88■■□□□ 1.73
ATP2A1O14983 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.88■■□□□ 1.73
ATP2A1O14983 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
ATP2A1O14983 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ATP2A1O14983 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
ATP2A1O14983 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
ATP2A1O14983 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
ATP2A1O14983 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.87■■□□□ 1.73
ATP2A1O14983 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
ATP2A1O14983 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.87■■□□□ 1.73
ATP2A1O14983 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC25.87■■□□□ 1.73
ATP2A1O14983 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ATP2A1O14983 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
ATP2A1O14983 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC25.86■■□□□ 1.73
ATP2A1O14983 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.86■■□□□ 1.73
ATP2A1O14983 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ATP2A1O14983 FP325331.1-202ENST00000623531 1380 ntBASIC25.86■■□□□ 1.73
ATP2A1O14983 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
ATP2A1O14983 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ATP2A1O14983 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.86■■□□□ 1.73
ATP2A1O14983 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC25.86■■□□□ 1.73
ATP2A1O14983 AL499627.2-201ENST00000606283 725 ntBASIC25.86■■□□□ 1.73
ATP2A1O14983 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ATP2A1O14983 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ATP2A1O14983 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
ATP2A1O14983 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ATP2A1O14983 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.85■■□□□ 1.73
ATP2A1O14983 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP2A1O14983 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP2A1O14983 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.85■■□□□ 1.73
ATP2A1O14983 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ATP2A1O14983 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATP2A1O14983 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATP2A1O14983 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATP2A1O14983 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ATP2A1O14983 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATP2A1O14983 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
ATP2A1O14983 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
ATP2A1O14983 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.84■■□□□ 1.73
ATP2A1O14983 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.84■■□□□ 1.73
ATP2A1O14983 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ATP2A1O14983 AC087623.3-201ENST00000607047 1098 ntBASIC25.84■■□□□ 1.73
ATP2A1O14983 AC092666.2-201ENST00000613287 246 ntBASIC25.84■■□□□ 1.73
ATP2A1O14983 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.84■■□□□ 1.73
ATP2A1O14983 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
ATP2A1O14983 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATP2A1O14983 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
ATP2A1O14983 SLC47A1P1-202ENST00000449666 945 ntBASIC25.83■■□□□ 1.73
ATP2A1O14983 AC104564.3-201ENST00000582367 638 ntBASIC25.83■■□□□ 1.73
ATP2A1O14983 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
ATP2A1O14983 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.83■■□□□ 1.73
ATP2A1O14983 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.83■■□□□ 1.72
ATP2A1O14983 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
ATP2A1O14983 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ATP2A1O14983 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
ATP2A1O14983 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
ATP2A1O14983 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.82■■□□□ 1.72
ATP2A1O14983 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.82■■□□□ 1.72
ATP2A1O14983 DUX4L4-201ENST00000566884 1269 ntBASIC25.82■■□□□ 1.72
ATP2A1O14983 ANKRD20A6P-201ENST00000618763 204 ntBASIC25.82■■□□□ 1.72
ATP2A1O14983 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
ATP2A1O14983 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ATP2A1O14983 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
ATP2A1O14983 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ATP2A1O14983 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ATP2A1O14983 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ATP2A1O14983 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
ATP2A1O14983 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC25.81■■□□□ 1.72
ATP2A1O14983 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ATP2A1O14983 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ATP2A1O14983 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.81■■□□□ 1.72
ATP2A1O14983 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ATP2A1O14983 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ATP2A1O14983 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ATP2A1O14983 AC133637.1-201ENST00000624115 1537 ntBASIC25.8■■□□□ 1.72
ATP2A1O14983 AC126544.1-201ENST00000580842 1059 ntBASIC25.8■■□□□ 1.72
ATP2A1O14983 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.8■■□□□ 1.72
ATP2A1O14983 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ATP2A1O14983 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ATP2A1O14983 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
ATP2A1O14983 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ATP2A1O14983 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.79■■□□□ 1.72
ATP2A1O14983 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ATP2A1O14983 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.79■■□□□ 1.72
ATP2A1O14983 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
ATP2A1O14983 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC25.79■■□□□ 1.72
ATP2A1O14983 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
ATP2A1O14983 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ATP2A1O14983 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.79■■□□□ 1.72
ATP2A1O14983 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ATP2A1O14983 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ATP2A1O14983 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ATP2A1O14983 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.78■■□□□ 1.72
ATP2A1O14983 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.78■■□□□ 1.72
ATP2A1O14983 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.78■■□□□ 1.72
ATP2A1O14983 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.78■■□□□ 1.72
ATP2A1O14983 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.78■■□□□ 1.72
ATP2A1O14983 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms