Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIRPB1O00241 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.96■□□□□ 0.63
SIRPB1O00241 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SIRPB1O00241 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SIRPB1O00241 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.96■□□□□ 0.63
SIRPB1O00241 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIRPB1O00241 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.96■□□□□ 0.63
SIRPB1O00241 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIRPB1O00241 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SIRPB1O00241 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIRPB1O00241 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIRPB1O00241 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIRPB1O00241 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIRPB1O00241 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIRPB1O00241 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIRPB1O00241 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.95■□□□□ 0.62
SIRPB1O00241 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIRPB1O00241 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIRPB1O00241 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SIRPB1O00241 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SIRPB1O00241 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIRPB1O00241 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SIRPB1O00241 AC021242.3-201ENST00000607598 1377 ntBASIC18.94■□□□□ 0.62
SIRPB1O00241 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.94■□□□□ 0.62
SIRPB1O00241 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPB1O00241 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
SIRPB1O00241 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SIRPB1O00241 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPB1O00241 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SIRPB1O00241 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPB1O00241 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.94■□□□□ 0.62
SIRPB1O00241 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPB1O00241 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.94■□□□□ 0.62
SIRPB1O00241 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.94■□□□□ 0.62
SIRPB1O00241 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPB1O00241 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SIRPB1O00241 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPB1O00241 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPB1O00241 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPB1O00241 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPB1O00241 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SIRPB1O00241 DUSP8P3-201ENST00000399571 1760 ntBASIC18.93■□□□□ 0.62
SIRPB1O00241 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
SIRPB1O00241 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.93■□□□□ 0.62
SIRPB1O00241 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.93■□□□□ 0.62
SIRPB1O00241 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
SIRPB1O00241 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPB1O00241 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SIRPB1O00241 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPB1O00241 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SIRPB1O00241 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPB1O00241 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.93■□□□□ 0.62
SIRPB1O00241 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SIRPB1O00241 AC012676.1-201ENST00000574705 1949 ntBASIC18.93■□□□□ 0.62
SIRPB1O00241 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPB1O00241 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPB1O00241 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPB1O00241 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPB1O00241 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPB1O00241 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPB1O00241 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SIRPB1O00241 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SIRPB1O00241 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SIRPB1O00241 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.92■□□□□ 0.62
SIRPB1O00241 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPB1O00241 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPB1O00241 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SIRPB1O00241 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPB1O00241 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.92■□□□□ 0.62
SIRPB1O00241 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPB1O00241 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPB1O00241 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPB1O00241 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPB1O00241 KRT125P-201ENST00000546827 989 ntBASIC18.92■□□□□ 0.62
SIRPB1O00241 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SIRPB1O00241 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPB1O00241 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
SIRPB1O00241 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPB1O00241 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.92■□□□□ 0.62
SIRPB1O00241 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPB1O00241 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPB1O00241 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.92■□□□□ 0.62
SIRPB1O00241 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPB1O00241 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPB1O00241 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIRPB1O00241 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.91■□□□□ 0.62
SIRPB1O00241 AC079630.1-202ENST00000618127 1840 ntBASIC18.91■□□□□ 0.62
SIRPB1O00241 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SIRPB1O00241 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SIRPB1O00241 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SIRPB1O00241 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SIRPB1O00241 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIRPB1O00241 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIRPB1O00241 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SIRPB1O00241 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.91■□□□□ 0.62
SIRPB1O00241 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIRPB1O00241 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.9■□□□□ 0.62
SIRPB1O00241 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIRPB1O00241 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SIRPB1O00241 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms