Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CLRN2A0PK11 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.96■■□□□ 1.91
CLRN2A0PK11 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.95■■□□□ 1.91
CLRN2A0PK11 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.95■■□□□ 1.91
CLRN2A0PK11 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.95■■□□□ 1.91
CLRN2A0PK11 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CLRN2A0PK11 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CLRN2A0PK11 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC26.95■■□□□ 1.9
CLRN2A0PK11 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
CLRN2A0PK11 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC26.95■■□□□ 1.9
CLRN2A0PK11 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.95■■□□□ 1.9
CLRN2A0PK11 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.95■■□□□ 1.9
CLRN2A0PK11 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.95■■□□□ 1.9
CLRN2A0PK11 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
CLRN2A0PK11 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.95■■□□□ 1.9
CLRN2A0PK11 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
CLRN2A0PK11 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
CLRN2A0PK11 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
CLRN2A0PK11 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
CLRN2A0PK11 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC26.94■■□□□ 1.9
CLRN2A0PK11 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
CLRN2A0PK11 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CLRN2A0PK11 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
CLRN2A0PK11 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
CLRN2A0PK11 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.93■■□□□ 1.9
CLRN2A0PK11 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
CLRN2A0PK11 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC26.93■■□□□ 1.9
CLRN2A0PK11 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
CLRN2A0PK11 AICDA-202ENST00000537228 667 ntTSL 5 BASIC26.93■■□□□ 1.9
CLRN2A0PK11 AC092437.1-201ENST00000624794 1048 ntBASIC26.93■■□□□ 1.9
CLRN2A0PK11 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
CLRN2A0PK11 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.93■■□□□ 1.9
CLRN2A0PK11 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
CLRN2A0PK11 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CLRN2A0PK11 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
CLRN2A0PK11 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.92■■□□□ 1.9
CLRN2A0PK11 IGHV3-19-201ENST00000521488 291 ntBASIC26.92■■□□□ 1.9
CLRN2A0PK11 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CLRN2A0PK11 AL137784.2-201ENST00000607332 1000 ntBASIC26.92■■□□□ 1.9
CLRN2A0PK11 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.92■■□□□ 1.9
CLRN2A0PK11 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
CLRN2A0PK11 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
CLRN2A0PK11 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CLRN2A0PK11 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CLRN2A0PK11 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CLRN2A0PK11 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CLRN2A0PK11 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
CLRN2A0PK11 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC26.9■■□□□ 1.9
CLRN2A0PK11 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.9■■□□□ 1.9
CLRN2A0PK11 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CLRN2A0PK11 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC26.9■■□□□ 1.9
CLRN2A0PK11 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CLRN2A0PK11 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC26.9■■□□□ 1.9
CLRN2A0PK11 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
CLRN2A0PK11 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.9■■□□□ 1.9
CLRN2A0PK11 AL358852.1-201ENST00000623174 1268 ntBASIC26.9■■□□□ 1.9
CLRN2A0PK11 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
CLRN2A0PK11 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CLRN2A0PK11 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CLRN2A0PK11 AC133637.1-201ENST00000624115 1537 ntBASIC26.9■■□□□ 1.9
CLRN2A0PK11 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.9■■□□□ 1.9
CLRN2A0PK11 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
CLRN2A0PK11 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.89■■□□□ 1.9
CLRN2A0PK11 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.89■■□□□ 1.9
CLRN2A0PK11 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CLRN2A0PK11 AC027612.3-201ENST00000413684 1047 ntBASIC26.89■■□□□ 1.9
CLRN2A0PK11 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.89■■□□□ 1.9
CLRN2A0PK11 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.89■■□□□ 1.89
CLRN2A0PK11 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
CLRN2A0PK11 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CLRN2A0PK11 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.89■■□□□ 1.89
CLRN2A0PK11 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
CLRN2A0PK11 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC26.88■■□□□ 1.89
CLRN2A0PK11 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
CLRN2A0PK11 MIR572-201ENST00000384983 95 ntBASIC26.88■■□□□ 1.89
CLRN2A0PK11 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.88■■□□□ 1.89
CLRN2A0PK11 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.88■■□□□ 1.89
CLRN2A0PK11 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.88■■□□□ 1.89
CLRN2A0PK11 AC010525.1-201ENST00000585559 441 ntBASIC26.88■■□□□ 1.89
CLRN2A0PK11 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.88■■□□□ 1.89
CLRN2A0PK11 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.87■■□□□ 1.89
CLRN2A0PK11 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.87■■□□□ 1.89
CLRN2A0PK11 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.87■■□□□ 1.89
CLRN2A0PK11 AC012414.1-201ENST00000556676 535 ntBASIC26.87■■□□□ 1.89
CLRN2A0PK11 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC26.87■■□□□ 1.89
CLRN2A0PK11 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CLRN2A0PK11 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.87■■□□□ 1.89
CLRN2A0PK11 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CLRN2A0PK11 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CLRN2A0PK11 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.85■■□□□ 1.89
CLRN2A0PK11 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
CLRN2A0PK11 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CLRN2A0PK11 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CLRN2A0PK11 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CLRN2A0PK11 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CLRN2A0PK11 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.85■■□□□ 1.89
CLRN2A0PK11 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.85■■□□□ 1.89
CLRN2A0PK11 AC123595.1-201ENST00000440769 1046 ntBASIC26.85■■□□□ 1.89
CLRN2A0PK11 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.85■■□□□ 1.89
CLRN2A0PK11 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 264.1 ms