Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
TCRBV9S1A1TA0A576 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.68■■□□□ 1.22
TCRBV9S1A1TA0A576 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC22.68■■□□□ 1.22
TCRBV9S1A1TA0A576 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TCRBV9S1A1TA0A576 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
TCRBV9S1A1TA0A576 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TCRBV9S1A1TA0A576 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TCRBV9S1A1TA0A576 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.67■■□□□ 1.22
TCRBV9S1A1TA0A576 PVT1_1.1-201ENST00000615125 194 ntBASIC22.67■■□□□ 1.22
TCRBV9S1A1TA0A576 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
TCRBV9S1A1TA0A576 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.67■■□□□ 1.22
TCRBV9S1A1TA0A576 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TCRBV9S1A1TA0A576 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
TCRBV9S1A1TA0A576 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
TCRBV9S1A1TA0A576 KRT18P24-201ENST00000344739 1156 ntBASIC22.66■■□□□ 1.22
TCRBV9S1A1TA0A576 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.66■■□□□ 1.22
TCRBV9S1A1TA0A576 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
TCRBV9S1A1TA0A576 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TCRBV9S1A1TA0A576 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TCRBV9S1A1TA0A576 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.66■■□□□ 1.22
TCRBV9S1A1TA0A576 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TCRBV9S1A1TA0A576 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
TCRBV9S1A1TA0A576 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.66■■□□□ 1.22
TCRBV9S1A1TA0A576 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
TCRBV9S1A1TA0A576 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.65■■□□□ 1.22
TCRBV9S1A1TA0A576 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
TCRBV9S1A1TA0A576 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.65■■□□□ 1.22
TCRBV9S1A1TA0A576 AC004448.1-201ENST00000458332 883 ntBASIC22.65■■□□□ 1.22
TCRBV9S1A1TA0A576 BHLHE23-202ENST00000612929 1109 ntBASIC22.65■■□□□ 1.22
TCRBV9S1A1TA0A576 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TCRBV9S1A1TA0A576 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TCRBV9S1A1TA0A576 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.65■■□□□ 1.22
TCRBV9S1A1TA0A576 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
TCRBV9S1A1TA0A576 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
TCRBV9S1A1TA0A576 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TCRBV9S1A1TA0A576 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TCRBV9S1A1TA0A576 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TCRBV9S1A1TA0A576 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
TCRBV9S1A1TA0A576 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
TCRBV9S1A1TA0A576 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.64■■□□□ 1.21
TCRBV9S1A1TA0A576 AC004987.1-201ENST00000428627 508 ntBASIC22.64■■□□□ 1.21
TCRBV9S1A1TA0A576 THA1P-201ENST00000590384 1145 ntBASIC22.64■■□□□ 1.21
TCRBV9S1A1TA0A576 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
TCRBV9S1A1TA0A576 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.64■■□□□ 1.21
TCRBV9S1A1TA0A576 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TCRBV9S1A1TA0A576 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.63■■□□□ 1.21
TCRBV9S1A1TA0A576 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TCRBV9S1A1TA0A576 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TCRBV9S1A1TA0A576 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.63■■□□□ 1.21
TCRBV9S1A1TA0A576 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.63■■□□□ 1.21
TCRBV9S1A1TA0A576 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.63■■□□□ 1.21
TCRBV9S1A1TA0A576 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TCRBV9S1A1TA0A576 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TCRBV9S1A1TA0A576 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.63■■□□□ 1.21
TCRBV9S1A1TA0A576 ATP5G2P3-201ENST00000429083 425 ntBASIC22.63■■□□□ 1.21
TCRBV9S1A1TA0A576 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TCRBV9S1A1TA0A576 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TCRBV9S1A1TA0A576 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.63■■□□□ 1.21
TCRBV9S1A1TA0A576 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.63■■□□□ 1.21
TCRBV9S1A1TA0A576 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 AC074183.2-201ENST00000623112 922 ntBASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
TCRBV9S1A1TA0A576 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TCRBV9S1A1TA0A576 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TCRBV9S1A1TA0A576 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.61■■□□□ 1.21
TCRBV9S1A1TA0A576 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.61■■□□□ 1.21
TCRBV9S1A1TA0A576 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TCRBV9S1A1TA0A576 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
TCRBV9S1A1TA0A576 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
TCRBV9S1A1TA0A576 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TCRBV9S1A1TA0A576 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TCRBV9S1A1TA0A576 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
TCRBV9S1A1TA0A576 AL353803.4-201ENST00000565882 1934 ntBASIC22.6■■□□□ 1.21
TCRBV9S1A1TA0A576 ESRRAP2-201ENST00000418437 1549 ntBASIC22.6■■□□□ 1.21
TCRBV9S1A1TA0A576 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TCRBV9S1A1TA0A576 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
TCRBV9S1A1TA0A576 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TCRBV9S1A1TA0A576 AC127496.7-201ENST00000625110 1798 ntBASIC22.6■■□□□ 1.21
TCRBV9S1A1TA0A576 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TCRBV9S1A1TA0A576 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.6■■□□□ 1.21
TCRBV9S1A1TA0A576 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.6■■□□□ 1.21
TCRBV9S1A1TA0A576 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.6■■□□□ 1.21
TCRBV9S1A1TA0A576 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
TCRBV9S1A1TA0A576 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.59■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms