Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC15.87■□□□□ 0.13
TRBV6-4A0A1B0GX49 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRBV6-4A0A1B0GX49 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-4A0A1B0GX49 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-4A0A1B0GX49 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-4A0A1B0GX49 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC15.86■□□□□ 0.13
TRBV6-4A0A1B0GX49 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-4A0A1B0GX49 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-4A0A1B0GX49 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-4A0A1B0GX49 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC15.86■□□□□ 0.13
TRBV6-4A0A1B0GX49 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRBV6-4A0A1B0GX49 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.86■□□□□ 0.13
TRBV6-4A0A1B0GX49 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRBV6-4A0A1B0GX49 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TRBV6-4A0A1B0GX49 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRBV6-4A0A1B0GX49 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 AC079630.1-202ENST00000618127 1840 ntBASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 AC133561.1-201ENST00000568600 2415 ntBASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC15.85■□□□□ 0.13
TRBV6-4A0A1B0GX49 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 AC092028.1-203ENST00000608262 953 ntBASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.84■□□□□ 0.13
TRBV6-4A0A1B0GX49 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRBV6-4A0A1B0GX49 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.83■□□□□ 0.13
TRBV6-4A0A1B0GX49 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
TRBV6-4A0A1B0GX49 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRBV6-4A0A1B0GX49 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-4A0A1B0GX49 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC15.83■□□□□ 0.12
TRBV6-4A0A1B0GX49 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-4A0A1B0GX49 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-4A0A1B0GX49 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-4A0A1B0GX49 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-4A0A1B0GX49 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-4A0A1B0GX49 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-4A0A1B0GX49 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TRBV6-4A0A1B0GX49 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRBV6-4A0A1B0GX49 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRBV6-4A0A1B0GX49 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 RARRES2P1-201ENST00000474487 481 ntBASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRBV6-4A0A1B0GX49 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV6-4A0A1B0GX49 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV6-4A0A1B0GX49 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV6-4A0A1B0GX49 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.81■□□□□ 0.12
TRBV6-4A0A1B0GX49 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRBV6-4A0A1B0GX49 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRBV6-4A0A1B0GX49 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC15.81■□□□□ 0.12
TRBV6-4A0A1B0GX49 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TRBV6-4A0A1B0GX49 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRBV6-4A0A1B0GX49 MIR4787-201ENST00000607364 84 ntBASIC15.81■□□□□ 0.12
TRBV6-4A0A1B0GX49 C9orf163-202ENST00000624034 2573 ntBASIC15.81■□□□□ 0.12
TRBV6-4A0A1B0GX49 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV6-4A0A1B0GX49 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV6-4A0A1B0GX49 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV6-4A0A1B0GX49 AC144652.1-201ENST00000609974 1624 ntBASIC15.8■□□□□ 0.12
TRBV6-4A0A1B0GX49 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms