Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC187A0A096LP49 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC187A0A096LP49 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC187A0A096LP49 AC145676.1-201ENST00000514988 2004 ntBASIC21.46■■□□□ 1.03
CCDC187A0A096LP49 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC187A0A096LP49 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.46■■□□□ 1.03
CCDC187A0A096LP49 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC187A0A096LP49 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC187A0A096LP49 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC187A0A096LP49 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC187A0A096LP49 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC187A0A096LP49 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.46■■□□□ 1.03
CCDC187A0A096LP49 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC187A0A096LP49 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.46■■□□□ 1.03
CCDC187A0A096LP49 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC187A0A096LP49 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
CCDC187A0A096LP49 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC187A0A096LP49 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC187A0A096LP49 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC187A0A096LP49 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
CCDC187A0A096LP49 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CCDC187A0A096LP49 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC187A0A096LP49 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.45■■□□□ 1.02
CCDC187A0A096LP49 AC012414.1-201ENST00000556676 535 ntBASIC21.45■■□□□ 1.02
CCDC187A0A096LP49 AL354811.1-201ENST00000610286 706 ntBASIC21.45■■□□□ 1.02
CCDC187A0A096LP49 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.45■■□□□ 1.02
CCDC187A0A096LP49 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.45■■□□□ 1.02
CCDC187A0A096LP49 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC187A0A096LP49 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC187A0A096LP49 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC187A0A096LP49 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC187A0A096LP49 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.44■■□□□ 1.02
CCDC187A0A096LP49 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC187A0A096LP49 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC187A0A096LP49 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC187A0A096LP49 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC187A0A096LP49 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CCDC187A0A096LP49 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC187A0A096LP49 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC187A0A096LP49 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC187A0A096LP49 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC187A0A096LP49 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC187A0A096LP49 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC187A0A096LP49 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CCDC187A0A096LP49 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CCDC187A0A096LP49 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC187A0A096LP49 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC187A0A096LP49 MIR6084-201ENST00000622012 110 ntBASIC21.43■■□□□ 1.02
CCDC187A0A096LP49 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC187A0A096LP49 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC187A0A096LP49 AC091060.1-201ENST00000623524 1766 ntBASIC21.43■■□□□ 1.02
CCDC187A0A096LP49 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC187A0A096LP49 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC187A0A096LP49 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC187A0A096LP49 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC187A0A096LP49 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC187A0A096LP49 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC187A0A096LP49 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC187A0A096LP49 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.42■■□□□ 1.02
CCDC187A0A096LP49 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.42■■□□□ 1.02
CCDC187A0A096LP49 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC187A0A096LP49 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.42■■□□□ 1.02
CCDC187A0A096LP49 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC187A0A096LP49 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.42■■□□□ 1.02
CCDC187A0A096LP49 AC133637.1-201ENST00000624115 1537 ntBASIC21.42■■□□□ 1.02
CCDC187A0A096LP49 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CCDC187A0A096LP49 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC187A0A096LP49 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC187A0A096LP49 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC187A0A096LP49 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CCDC187A0A096LP49 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.41■■□□□ 1.02
CCDC187A0A096LP49 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CCDC187A0A096LP49 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC187A0A096LP49 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCDC187A0A096LP49 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC187A0A096LP49 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC187A0A096LP49 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CCDC187A0A096LP49 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC187A0A096LP49 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC187A0A096LP49 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC187A0A096LP49 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC187A0A096LP49 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCDC187A0A096LP49 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC187A0A096LP49 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
CCDC187A0A096LP49 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC187A0A096LP49 AC092437.1-201ENST00000624794 1048 ntBASIC21.4■■□□□ 1.02
CCDC187A0A096LP49 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.4■■□□□ 1.02
CCDC187A0A096LP49 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC187A0A096LP49 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC187A0A096LP49 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CCDC187A0A096LP49 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC187A0A096LP49 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC187A0A096LP49 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC187A0A096LP49 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.39■■□□□ 1.01
CCDC187A0A096LP49 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC187A0A096LP49 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.39■■□□□ 1.01
CCDC187A0A096LP49 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC187A0A096LP49 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC187A0A096LP49 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC187A0A096LP49 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms