Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 NPTN-IT1-201ENST00000628401 2283 ntBASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 AL445250.1-201ENST00000641671 2259 ntBASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 PGGT1BP2-201ENST00000398621 1028 ntBASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 UPF3AP3-201ENST00000420996 769 ntBASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 AL442647.2-201ENST00000429864 857 ntBASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 BX324167.2-201ENST00000623717 3316 ntBASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 APPBP2-201ENST00000083182 6478 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 PCDHA6-201ENST00000378126 3267 ntBASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
KCNIP3Q9Y2W7 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 PHB-210ENST00000511832 1509 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 CLCN4-203ENST00000421085 6534 ntTSL 5 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 RPSAP43-201ENST00000402237 625 ntBASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 AC245100.3-201ENST00000441281 285 ntBASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 FTLP10-202ENST00000505798 471 ntBASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 IGHV3-42-201ENST00000520410 361 ntBASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 AC009407.1-201ENST00000568958 598 ntBASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 KSR1-207ENST00000578981 748 ntTSL 4 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 AC015911.4-201ENST00000588022 1070 ntBASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 AC010327.4-202ENST00000591484 748 ntBASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC11.92□□□□□ -0.5
KCNIP3Q9Y2W7 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms